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Ssed_0094 Ssed_0094 Ssed_0189 Ssed_0189 cyoE cyoE Ssed_0191 Ssed_0191 Ssed_0192 Ssed_0192 Ssed_0193 Ssed_0193 Ssed_0195 Ssed_0195 Ssed_0196 Ssed_0196 Ssed_0197 Ssed_0197 Ssed_0198 Ssed_0198 Ssed_0261 Ssed_0261 Ssed_0262 Ssed_0262 Ssed_0638 Ssed_0638 Ssed_0672 Ssed_0672 Ssed_0801 Ssed_0801 Ssed_0802 Ssed_0802 Ssed_0803 Ssed_0803 Ssed_1328 Ssed_1328 Ssed_1377 Ssed_1377 Ssed_1469 Ssed_1469 Ssed_2210 Ssed_2210 Ssed_2211 Ssed_2211 Ssed_2212 Ssed_2212 Ssed_2213 Ssed_2213 Ssed_2214 Ssed_2214 Ssed_2215 Ssed_2215 Ssed_2216 Ssed_2216 Ssed_2217 Ssed_2217 Ssed_2218 Ssed_2218 Ssed_2219 Ssed_2219 Ssed_2220 Ssed_2220 Ssed_2684 Ssed_2684 Ssed_3343 Ssed_3343 Ssed_3541 Ssed_3541 Ssed_3694 Ssed_3694 Ssed_3824 Ssed_3824 Ssed_3825 Ssed_3825 Ssed_3826 Ssed_3826 Ssed_4286 Ssed_4286 Ssed_4414 Ssed_4414 Ssed_4476 Ssed_4476
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Ssed_0094KEGG: slo:Shew_3716 cytochrome c, class I. (206 aa)
Ssed_0189KEGG: shw:Sputw3181_0125 electron transport protein SCO1/SenC. (218 aa)
cyoEProtoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. (304 aa)
Ssed_0191KEGG: slo:Shew_0118 cytochrome oxidase assembly. (328 aa)
Ssed_0192KEGG: slo:Shew_0119 hypothetical protein. (181 aa)
Ssed_0193KEGG: shw:Sputw3181_0129 hypothetical protein. (252 aa)
Ssed_0195KEGG: slo:Shew_0122 cytochrome c oxidase, subunit III. (291 aa)
Ssed_0196KEGG: slo:Shew_0123 cytochrome c oxidase assembly protein CtaG/Cox11. (189 aa)
Ssed_0197Cytochrome-c oxidase; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. (534 aa)
Ssed_0198Cytochrome-c oxidase; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). (524 aa)
Ssed_0261KEGG: slo:Shew_3581 peptidase M16 domain protein. (443 aa)
Ssed_0262KEGG: slo:Shew_3580 peptidase M16 domain protein. (480 aa)
Ssed_0638KEGG: slo:Shew_0465 hypothetical protein. (132 aa)
Ssed_0672KEGG: sdn:Sden_1130 putative NADH dehydrogenase with NAD(P)-binding domain. (235 aa)
Ssed_0801Ubiquinol--cytochrome-c reductase; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. (196 aa)
Ssed_0802Cytochrome b/b6, N-terminal domain; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. (404 aa)
Ssed_0803Cytochrome c1; KEGG: slo:Shew_0572 cytochrome c1. (233 aa)
Ssed_1328KEGG: slo:Shew_1226 peptidase M16 domain protein. (944 aa)
Ssed_1377Esterase/lipase-like protein; KEGG: xfa:XF1743 esterase. (341 aa)
Ssed_1469KEGG: slo:Shew_2554 OmpW family protein. (215 aa)
Ssed_2210KEGG: shn:Shewana3_2106 hypothetical protein. (141 aa)
Ssed_2211KEGG: slo:Shew_1985 cytochrome c oxidase, cbb3-type, subunit I; Belongs to the heme-copper respiratory oxidase family. (475 aa)
Ssed_2212KEGG: shn:Shewana3_2108 cytochrome c oxidase, cbb3-type, subunit II. (208 aa)
Ssed_2213KEGG: slo:Shew_1987 Cbb3-type cytochrome oxidase component. (55 aa)
Ssed_2214Cytochrome c oxidase, cbb3-type, subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. (322 aa)
Ssed_2215KEGG: slo:Shew_1989 hypothetical protein. (159 aa)
Ssed_2216KEGG: slo:Shew_1990 heavy metal translocating P-type ATPase. (792 aa)
Ssed_2217KEGG: slo:Shew_1991 cytochrome oxidase maturation protein, cbb3-type. (61 aa)
Ssed_2218KEGG: slo:Shew_1992 hypothetical protein. (230 aa)
Ssed_2219KEGG: slo:Shew_1993 transcriptional regulator, Crp/Fnr family. (249 aa)
Ssed_2220KEGG: slo:Shew_1994 UspA domain protein. (310 aa)
Ssed_2684KEGG: shm:Shewmr7_2292 cytochrome-c peroxidase. (330 aa)
Ssed_3343KEGG: slo:Shew_2785 4Fe-4S ferredoxin, iron-sulfur binding domain protein. (85 aa)
Ssed_3541KEGG: ppr:PBPRA2526 hypothetical protein similar to lipase. (310 aa)
Ssed_3694KEGG: shn:Shewana3_3228 4Fe-4S ferredoxin, iron-sulfur binding domain protein. (481 aa)
Ssed_3824KEGG: slo:Shew_0655 peptidase M16 domain protein. (469 aa)
Ssed_3825KEGG: slo:Shew_0654 peptidase M16 domain protein. (511 aa)
Ssed_3826KEGG: slo:Shew_0631 AFG1-family ATPase. (406 aa)
Ssed_4286KEGG: slo:Shew_0191 cytochrome c, class I. (97 aa)
Ssed_4414Coproporphyrinogen dehydrogenase; KEGG: slo:Shew_0073 radical SAM domain protein. (445 aa)
Ssed_4476KEGG: slo:Shew_3812 4Fe-4S ferredoxin, iron-sulfur binding domain protein. (479 aa)
Your Current Organism:
Shewanella sediminis
NCBI taxonomy Id: 425104
Other names: S. sediminis HAW-EB3, Shewanella sediminis HAW-EB3, Shewanella sediminis str. HAW-EB3, Shewanella sediminis strain HAW-EB3
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