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Ssed_0106 Ssed_0106 Ssed_0107 Ssed_0107 Ssed_0108 Ssed_0108 Ssed_0713 Ssed_0713 Ssed_0714 Ssed_0714 Ssed_0715 Ssed_0715 Ssed_0716 Ssed_0716 Ssed_0919 Ssed_0919 arnF arnF arnE arnE arnT arnT arnD arnD arnA arnA arnC arnC arnB arnB Ssed_1517 Ssed_1517 Ssed_1943 Ssed_1943 Ssed_2205 Ssed_2205 Ssed_2381 Ssed_2381 Ssed_2382 Ssed_2382 Ssed_2383 Ssed_2383 Ssed_2534 Ssed_2534 Ssed_2704 Ssed_2704 Ssed_2931 Ssed_2931 Ssed_2932 Ssed_2932 Ssed_2946 Ssed_2946 Ssed_2947 Ssed_2947 Ssed_2948 Ssed_2948 Ssed_2949 Ssed_2949 Ssed_2950 Ssed_2950 Ssed_2951 Ssed_2951 Ssed_2952 Ssed_2952 Ssed_2955 Ssed_2955 Ssed_2963 Ssed_2963 Ssed_2964 Ssed_2964 Ssed_2965 Ssed_2965 Ssed_2966 Ssed_2966 Ssed_2967 Ssed_2967 Ssed_2968 Ssed_2968 Ssed_2969 Ssed_2969 Ssed_2970 Ssed_2970 Ssed_2971 Ssed_2971 Ssed_2972 Ssed_2972 Ssed_2973 Ssed_2973 Ssed_2974 Ssed_2974 Ssed_2976 Ssed_2976 Ssed_2977 Ssed_2977 Ssed_2978 Ssed_2978 Ssed_2979 Ssed_2979 Ssed_2980 Ssed_2980 Ssed_2981 Ssed_2981 Ssed_2982 Ssed_2982 Ssed_2983 Ssed_2983 Ssed_2990 Ssed_2990 Ssed_2991 Ssed_2991 Ssed_2992 Ssed_2992 Ssed_2993 Ssed_2993 Ssed_2997 Ssed_2997 Ssed_2998 Ssed_2998 Ssed_2999 Ssed_2999 Ssed_3000 Ssed_3000 Ssed_3001 Ssed_3001 Ssed_3002 Ssed_3002 Ssed_3003 Ssed_3003 Ssed_3005 Ssed_3005 Ssed_3006 Ssed_3006 Ssed_3007 Ssed_3007 Ssed_3008 Ssed_3008 Ssed_3009 Ssed_3009 Ssed_3010 Ssed_3010 Ssed_3011 Ssed_3011 Ssed_3012 Ssed_3012 Ssed_3013 Ssed_3013 Ssed_3014 Ssed_3014 Ssed_3015 Ssed_3015 Ssed_3016 Ssed_3016 Ssed_3017 Ssed_3017 Ssed_3018 Ssed_3018 Ssed_3019 Ssed_3019 wecA wecA Ssed_3097 Ssed_3097 Ssed_3098 Ssed_3098 Ssed_3099 Ssed_3099 Ssed_3100 Ssed_3100 Ssed_3101 Ssed_3101 Ssed_3102 Ssed_3102 Ssed_3103 Ssed_3103 Ssed_3104 Ssed_3104 Ssed_3105 Ssed_3105 Ssed_3106 Ssed_3106 Ssed_3107 Ssed_3107 Ssed_3109 Ssed_3109 Ssed_3646 Ssed_3646 Ssed_3782 Ssed_3782 Ssed_3788 Ssed_3788
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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experimentally determined
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Ssed_0106dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family. (289 aa)
Ssed_0107KEGG: abo:ABO_0910 dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. (367 aa)
Ssed_0108dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. (190 aa)
Ssed_0713KEGG: ppr:PBPRB0750 hypothetical glycosyl transferase. (343 aa)
Ssed_0714KEGG: ppr:PBPRB0751 hypothetical protein. (464 aa)
Ssed_0715KEGG: cps:CPS_1862 hypothetical protein. (142 aa)
Ssed_0716KEGG: slo:Shew_0908 OmpA/MotB domain protein. (226 aa)
Ssed_0919KEGG: vpa:VP0236 nucleotide sugar dehydrogenase. (388 aa)
arnFConserved hypothetical protein; Translocates 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol (alpha-L-Ara4N-phosphoundecaprenol) from the cytoplasmic to the periplasmic side of the inner membrane; Belongs to the ArnF family. (145 aa)
arnEConserved hypothetical protein; Translocates 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol (alpha-L-Ara4N-phosphoundecaprenol) from the cytoplasmic to the periplasmic side of the inner membrane; Belongs to the ArnE family. (120 aa)
arnTundecaprenylphosphate-alpha-4-amino-4-deoxy-L- arabinosearabinosyltra nsferase; Catalyzes the transfer of the L-Ara4N moiety of the glycolipid undecaprenyl phosphate-alpha-L-Ara4N to lipid A. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides. Belongs to the glycosyltransferase 83 family. (546 aa)
arnDPolysaccharide deacetylase; Catalyzes the deformylation of 4-deoxy-4-formamido-L- arabinose-phosphoundecaprenol to 4-amino-4-deoxy-L-arabinose- phosphoundecaprenol. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides; Belongs to the polysaccharide deacetylase family. ArnD deformylase subfamily. (305 aa)
arnABifunctional polymyxin resistance ArnA protein (polymyxin resistanceprotein PmrI); Bifunctional enzyme that catalyzes the oxidative decarboxylation of UDP-glucuronic acid (UDP-GlcUA) to UDP-4-keto- arabinose (UDP-Ara4O) and the addition of a formyl group to UDP-4- amino-4-deoxy-L-arabinose (UDP-L-Ara4N) to form UDP-L-4-formamido- arabinose (UDP-L-Ara4FN). The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides; In the C-terminal section; belongs to the NAD(P)-dependent epimerase/dehydratase family. UDP-glucuronic aci [...] (660 aa)
arnCGlycosyl transferase, group 2 family protein; Catalyzes the transfer of 4-deoxy-4-formamido-L-arabinose from UDP to undecaprenyl phosphate. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides. (331 aa)
arnBUDP-4-amino-4-deoxy-L-arabinose-- oxoglutarateaminotransferase; Catalyzes the conversion of UDP-4-keto-arabinose (UDP-Ara4O) to UDP-4-amino-4-deoxy-L-arabinose (UDP-L-Ara4N). The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides; Belongs to the DegT/DnrJ/EryC1 family. ArnB subfamily. (388 aa)
Ssed_1517KEGG: sbl:Sbal_1561 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I. (582 aa)
Ssed_1943Transposase; KEGG: asa:ASA_P4G164 transposase. (131 aa)
Ssed_2205KEGG: sty:STY3192 hypothetical protein. (219 aa)
Ssed_2381KEGG: bcz:BCZK5129 glycosyltransferase, group 2 family protein. (313 aa)
Ssed_2382KEGG: bte:BTH_II2259 generic methyltransferase. (243 aa)
Ssed_2383KEGG: cbu:CBU_0617 hypothetical protein. (535 aa)
Ssed_2534KEGG: slo:Shew_3111 NAD-dependent epimerase/dehydratase. (289 aa)
Ssed_2704KEGG: maq:Maqu_0074 initiation factor 2B related; Belongs to the eIF-2B alpha/beta/delta subunits family. (312 aa)
Ssed_2931KEGG: shw:Sputw3181_2716 UTP-glucose-1-phosphate uridylyltransferase GalU. (306 aa)
Ssed_2932KEGG: shn:Shewana3_2783 UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (337 aa)
Ssed_2946KEGG: shn:Shewana3_2010 polysaccharide export protein. (439 aa)
Ssed_2947KEGG: shn:Shewana3_2009 hypothetical protein. (469 aa)
Ssed_2948KEGG: shn:Shewana3_2008 hypothetical protein. (415 aa)
Ssed_2949KEGG: shn:Shewana3_2007 polysaccharide biosynthesis protein. (455 aa)
Ssed_2950KEGG: shn:Shewana3_2006 glycosyl transferase, family 2. (347 aa)
Ssed_2951KEGG: shn:Shewana3_2005 glycosyl transferase, WecB/TagA/CpsF family. (716 aa)
Ssed_2952KEGG: shn:Shewana3_2004 nucleotidyl transferase. (505 aa)
Ssed_2955Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family. (308 aa)
Ssed_2963Hypothetical protein. (399 aa)
Ssed_2964KEGG: msu:MS1496 RfaG protein. (304 aa)
Ssed_2965KEGG: pgi:PG0119 glycosyl transferase, WecB/TagA/CpsF family; Belongs to the glycosyltransferase 26 family. (228 aa)
Ssed_2966KEGG: eca:ECA4208 UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. (379 aa)
Ssed_2967KEGG: tdn:Tmden_1418 UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. (366 aa)
Ssed_2968Acetyltransferase (isoleucine patch superfamily)-like protein; KEGG: acb:A1S_0057 capsular polysaccharide synthesis enzyme. (178 aa)
Ssed_2969Membrane protein involved in the export of O-antigen and teichoic acid-like protein; KEGG: mxa:MXAN_3260 hypothetical protein. (449 aa)
Ssed_2970KEGG: saz:Sama_2257 DegT/DnrJ/EryC1/StrS family protein; Belongs to the DegT/DnrJ/EryC1 family. (366 aa)
Ssed_2971KEGG: saz:Sama_2258 putative acetyltransferase. (192 aa)
Ssed_2972KEGG: msu:MS1500 MviM protein. (314 aa)
Ssed_2973KEGG: saz:Sama_2260 UDP-glucose/GDP-mannose dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. (423 aa)
Ssed_2974KEGG: bca:BCE_0978 hypothetical protein. (433 aa)
Ssed_2976KEGG: pfa:MAL8P1.133 hypothetical protein, conserved. (150 aa)
Ssed_2977Conserved hypothetical protein; KEGG: dre:450072 zgc:101623. (160 aa)
Ssed_2978Glycosyltransferase-like protein; KEGG: nmu:Nmul_A0253 glycosyl transferase, group 1. (357 aa)
Ssed_2979KEGG: hch:HCH_03412 hypothetical protein. (508 aa)
Ssed_2980KEGG: hch:HCH_05271 glycosyltransferase involved in cell wall biogenesis. (317 aa)
Ssed_2981KEGG: det:DET0213 hypothetical protein. (387 aa)
Ssed_2982KEGG: mpt:Mpe_A0731 nitroreductase-like protein. (363 aa)
Ssed_2983KEGG: ava:Ava_1044 polysaccharide biosynthesis protein. (427 aa)
Ssed_2990KEGG: vfi:VF0166 dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. (352 aa)
Ssed_2991KEGG: art:Arth_2683 glycosyl transferase, family 2. (300 aa)
Ssed_2992KEGG: spd:SPD_0321 glycosyl transferase, group 2 family protein. (332 aa)
Ssed_2993KEGG: ppr:PBPRB1964 putative transposase. (57 aa)
Ssed_2997KEGG: psb:Psyr_1578 hypothetical protein. (232 aa)
Ssed_2998KEGG: rme:Rmet_5241 protein of unknown function DUF201. (394 aa)
Ssed_2999Hypothetical protein. (280 aa)
Ssed_3000KEGG: ctc:CTC01708 NDP-sugar dehydratase or epimerase. (330 aa)
Ssed_3001Hypothetical protein; KEGG: ter:Tery_3136 capsular polysaccharide biosynthesis protein-like. (521 aa)
Ssed_3002Hypothetical protein; KEGG: ter:Tery_1499 TPR repeat. (381 aa)
Ssed_3003Pyridoxal phosphate-dependent enzyme; Apparently involved in regulation of cell wall biogenesis-like protein; KEGG: rsq:Rsph17025_3841 hypothetical protein; Belongs to the DegT/DnrJ/EryC1 family. (378 aa)
Ssed_3005KEGG: maq:Maqu_2626 hypothetical protein. (274 aa)
Ssed_3006KEGG: rpb:RPB_1995 hypothetical protein. (331 aa)
Ssed_3007Hypothetical protein. (423 aa)
Ssed_3008Hydrolase (HAD superfamily)-like protein; KEGG: cje:Cj1432c putative sugar transferase. (260 aa)
Ssed_3009KEGG: art:Arth_1239 glycosyl transferase, family 2. (296 aa)
Ssed_3010Rfbqrso22-4-like protein; KEGG: vco:VC0395_A2635 rfbqrso22-4. (137 aa)
Ssed_3011dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family. (303 aa)
Ssed_3012dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. (181 aa)
Ssed_3013Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family. (296 aa)
Ssed_3014KEGG: maq:Maqu_2633 ABC transporter related. (238 aa)
Ssed_3015ABC-type polysaccharide/polyol phosphate export systems permease component-like protein; KEGG: maq:Maqu_2634 ABC-2 type transporter. (257 aa)
Ssed_3016KEGG: noc:Noc_0753 hypothetical protein. (122 aa)
Ssed_3017KEGG: noc:Noc_0752 glycosyl transferase, family 2. (235 aa)
Ssed_3018Hypothetical protein; KEGG: sfu:Sfum_2298 tetratricopeptide TPR_2 repeat protein. (540 aa)
Ssed_3019KEGG: pin:Ping_0044 hypothetical protein. (447 aa)
wecAUndecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase; Catalyzes the transfer of the GlcNAc-1-phosphate moiety from UDP-GlcNAc onto the carrier lipid undecaprenyl phosphate (C55-P), yielding GlcNAc-pyrophosphoryl-undecaprenyl (GlcNAc-PP-C55). Belongs to the glycosyltransferase 4 family. WecA subfamily. (350 aa)
Ssed_3097KEGG: vvu:VV1_0811 predicted nucleoside-diphosphate sugar epimerase. (403 aa)
Ssed_3098KEGG: vfi:VF0141 UDP-bacillosamine synthetase; Belongs to the DegT/DnrJ/EryC1 family. (385 aa)
Ssed_3099KEGG: vpa:VP0199 putative NeuC. (387 aa)
Ssed_3100KEGG: vvy:VV0312 sialic acid synthase. (357 aa)
Ssed_3101KEGG: vfi:VF0144 sialic acid biosynthesis protein NeuD. (206 aa)
Ssed_3102KEGG: vfi:VF0145 mannose-1-phosphate guanyltransferase. (352 aa)
Ssed_3103Dehydrogenase; KEGG: vvy:VV0315 predicted dehydrogenase. (326 aa)
Ssed_3104N-acylneuraminate cytidylyltransferase; KEGG: vvy:VV0316 CMP-N-acetylneuraminic acid synthetase. (233 aa)
Ssed_3105KEGG: vvy:VV0317 flagellin modification protein A. (252 aa)
Ssed_3106KEGG: vvy:VV0322 acetyltransferase. (183 aa)
Ssed_3107KEGG: shw:Sputw3181_1377 protein of unknown function DUF115. (841 aa)
Ssed_3109KEGG: sbl:Sbal_2970 hypothetical protein. (191 aa)
Ssed_3646KEGG: mag:amb3711 hypothetical protein. (414 aa)
Ssed_3782KEGG: sbl:Sbal_2612 hypothetical protein. (420 aa)
Ssed_3788KEGG: ana:all2291 glycosyltransferase. (349 aa)
Your Current Organism:
Shewanella sediminis
NCBI taxonomy Id: 425104
Other names: S. sediminis HAW-EB3, Shewanella sediminis HAW-EB3, Shewanella sediminis str. HAW-EB3, Shewanella sediminis strain HAW-EB3
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