STRINGSTRING
Ssed_0278 Ssed_0278 Ssed_0279 Ssed_0279 Ssed_0740 Ssed_0740 Ssed_0741 Ssed_0741 Ssed_2316 Ssed_2316
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Ssed_0278KEGG: sbl:Sbal_0260 integral membrane sensor signal transduction histidine kinase. (455 aa)
Ssed_0279KEGG: slo:Shew_3570 two component transcriptional regulator, winged helix family. (227 aa)
Ssed_0740Signal transduction histidine kinase-like protein; KEGG: chy:CHY_1856 sensor histidine kinase. (470 aa)
Ssed_0741KEGG: mgm:Mmc1_3443 response regulator receiver protein. (210 aa)
Ssed_2316KEGG: saz:Sama_1718 response regulator receiver protein. (226 aa)
Your Current Organism:
Shewanella sediminis
NCBI taxonomy Id: 425104
Other names: S. sediminis HAW-EB3, Shewanella sediminis HAW-EB3, Shewanella sediminis str. HAW-EB3, Shewanella sediminis strain HAW-EB3
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