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Ssed_0229 Ssed_0229 Ssed_0350 Ssed_0350 Ssed_0359 Ssed_0359 Ssed_0838 Ssed_0838 Ssed_1307 Ssed_1307 Ssed_1404 Ssed_1404 napA napA Ssed_1954 Ssed_1954 Ssed_2799 Ssed_2799 Ssed_2923 Ssed_2923 Ssed_3360 Ssed_3360 Ssed_3636 Ssed_3636 napA-2 napA-2 Ssed_3982 Ssed_3982 Ssed_4047 Ssed_4047 Ssed_4208 Ssed_4208 Ssed_4211 Ssed_4211 Ssed_4417 Ssed_4417 Ssed_4421 Ssed_4421
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Ssed_0229KEGG: spc:Sputcn32_0627 anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (838 aa)
Ssed_0350KEGG: sfr:Sfri_3128 anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (809 aa)
Ssed_0359KEGG: sfr:Sfri_3128 anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (816 aa)
Ssed_0838KEGG: slo:Shew_0809 formate dehydrogenase, alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (1440 aa)
Ssed_1307KEGG: sfr:Sfri_3128 anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (829 aa)
Ssed_1404KEGG: sfr:Sfri_3128 anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (790 aa)
napAAnaerobic dehydrogenase, typically selenocysteine-containing; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite. (829 aa)
Ssed_1954KEGG: psa:PST_0896 respiratory nitrate reductase alpha chain; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (1254 aa)
Ssed_2799KEGG: sde:Sde_2353 nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. (734 aa)
Ssed_2923KEGG: sfr:Sfri_3128 anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (810 aa)
Ssed_3360KEGG: sfr:Sfri_1994 trimethylamine-N-oxide reductase TorA; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (830 aa)
Ssed_3636KEGG: nha:Nham_3287 molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (765 aa)
napA-2Periplasmic nitrate reductase, large subunit; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite. (826 aa)
Ssed_3982KEGG: slo:Shew_3243 molydopterin dinucleotide-binding region; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (1026 aa)
Ssed_4047KEGG: slo:Shew_0608 molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (760 aa)
Ssed_4208KEGG: slo:Shew_0245 molydopterin dinucleotide-binding region; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (1012 aa)
Ssed_4211KEGG: slo:Shew_0242 molydopterin dinucleotide-binding region; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (738 aa)
Ssed_4417KEGG: slo:Shew_0063 molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (951 aa)
Ssed_4421KEGG: slo:Shew_0059 molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (949 aa)
Your Current Organism:
Shewanella sediminis
NCBI taxonomy Id: 425104
Other names: S. sediminis HAW-EB3, Shewanella sediminis HAW-EB3, Shewanella sediminis str. HAW-EB3, Shewanella sediminis strain HAW-EB3
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