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Ssed_3102 Ssed_3102 Ssed_0110 Ssed_0110 mobA mobA Ssed_0320 Ssed_0320 Ssed_0338 Ssed_0338 Ssed_0713 Ssed_0713 arnC arnC Ssed_0969 Ssed_0969 ispD ispD Ssed_2381 Ssed_2381 Ssed_3104 Ssed_3104 kdsB kdsB Ssed_2931 Ssed_2931 Ssed_2950 Ssed_2950 Ssed_2952 Ssed_2952 Ssed_2955 Ssed_2955 Ssed_2980 Ssed_2980 Ssed_2991 Ssed_2991 Ssed_2992 Ssed_2992 Ssed_3009 Ssed_3009 Ssed_3013 Ssed_3013 glmU glmU Ssed_3017 Ssed_3017
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Ssed_3102KEGG: vfi:VF0145 mannose-1-phosphate guanyltransferase. (352 aa)
Ssed_0110KEGG: sdn:Sden_0205 glycosyl transferase, family 2. (251 aa)
mobAMolybdopterin-guanine dinucleotide biosynthesis protein A; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor; Belongs to the MobA family. (196 aa)
Ssed_0320KEGG: slo:Shew_3516 glycosyl transferase, family 2. (567 aa)
Ssed_0338KEGG: shm:Shewmr7_0332 hypothetical protein. (322 aa)
Ssed_0713KEGG: ppr:PBPRB0750 hypothetical glycosyl transferase. (343 aa)
arnCGlycosyl transferase, group 2 family protein; Catalyzes the transfer of 4-deoxy-4-formamido-L-arabinose from UDP to undecaprenyl phosphate. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides. (331 aa)
Ssed_0969KEGG: slo:Shew_0884 nucleotidyl transferase. (229 aa)
ispD4-diphosphocytidyl-2C-methyl-D-erythritol synthase; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP). (234 aa)
Ssed_2381KEGG: bcz:BCZK5129 glycosyltransferase, group 2 family protein. (313 aa)
Ssed_3104N-acylneuraminate cytidylyltransferase; KEGG: vvy:VV0316 CMP-N-acetylneuraminic acid synthetase. (233 aa)
kdsB3-deoxy-D-manno-octulosonate cytidylyltransferase; Activates KDO8N (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in the Shewanella genus. Belongs to the KdsB family. (245 aa)
Ssed_2931KEGG: shw:Sputw3181_2716 UTP-glucose-1-phosphate uridylyltransferase GalU. (306 aa)
Ssed_2950KEGG: shn:Shewana3_2006 glycosyl transferase, family 2. (347 aa)
Ssed_2952KEGG: shn:Shewana3_2004 nucleotidyl transferase. (505 aa)
Ssed_2955Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family. (308 aa)
Ssed_2980KEGG: hch:HCH_05271 glycosyltransferase involved in cell wall biogenesis. (317 aa)
Ssed_2991KEGG: art:Arth_2683 glycosyl transferase, family 2. (300 aa)
Ssed_2992KEGG: spd:SPD_0321 glycosyl transferase, group 2 family protein. (332 aa)
Ssed_3009KEGG: art:Arth_1239 glycosyl transferase, family 2. (296 aa)
Ssed_3013Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family. (296 aa)
glmUUDP-N-acetylglucosamine pyrophosphorylase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. In the C-terminal section; belongs to the transferase hexapeptide repeat family. (455 aa)
Ssed_3017KEGG: noc:Noc_0752 glycosyl transferase, family 2. (235 aa)
Your Current Organism:
Shewanella sediminis
NCBI taxonomy Id: 425104
Other names: S. sediminis HAW-EB3, Shewanella sediminis HAW-EB3, Shewanella sediminis str. HAW-EB3, Shewanella sediminis strain HAW-EB3
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