STRINGSTRING
Ssed_3017 Ssed_3017 Ssed_2991 Ssed_2991 Ssed_2980 Ssed_2980 Ssed_0110 Ssed_0110 Ssed_0320 Ssed_0320 Ssed_0713 Ssed_0713 arnC arnC Ssed_2381 Ssed_2381 Ssed_2992 Ssed_2992
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Ssed_3017KEGG: noc:Noc_0752 glycosyl transferase, family 2. (235 aa)
Ssed_2991KEGG: art:Arth_2683 glycosyl transferase, family 2. (300 aa)
Ssed_2980KEGG: hch:HCH_05271 glycosyltransferase involved in cell wall biogenesis. (317 aa)
Ssed_0110KEGG: sdn:Sden_0205 glycosyl transferase, family 2. (251 aa)
Ssed_0320KEGG: slo:Shew_3516 glycosyl transferase, family 2. (567 aa)
Ssed_0713KEGG: ppr:PBPRB0750 hypothetical glycosyl transferase. (343 aa)
arnCGlycosyl transferase, group 2 family protein; Catalyzes the transfer of 4-deoxy-4-formamido-L-arabinose from UDP to undecaprenyl phosphate. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides. (331 aa)
Ssed_2381KEGG: bcz:BCZK5129 glycosyltransferase, group 2 family protein. (313 aa)
Ssed_2992KEGG: spd:SPD_0321 glycosyl transferase, group 2 family protein. (332 aa)
Your Current Organism:
Shewanella sediminis
NCBI taxonomy Id: 425104
Other names: S. sediminis HAW-EB3, Shewanella sediminis HAW-EB3, Shewanella sediminis str. HAW-EB3, Shewanella sediminis strain HAW-EB3
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