(64 nodes) Proteasome complex network (Pygocentrus nattereri)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	psmd4	Proteasome 26S subunit, non-ATPase 4a. (373 aa)
	LOC108443807	Proteasome subunit alpha type. (246 aa)
	LOC108443803	AAA domain-containing protein; Belongs to the AAA ATPase family. (440 aa)
	adrm1	Adhesion regulating molecule 1. (387 aa)
	psmd3	Proteasome 26S subunit, non-ATPase 3. (621 aa)
	LOC108426450	Proteasome 26S subunit, non-ATPase 11b. (422 aa)
	LOC108425697	Proteasome endopeptidase complex. (164 aa)
	LOC108428647	Proteasome 26S subunit, ATPase 1a; Belongs to the AAA ATPase family. (440 aa)
	ENSPNAP00000003324	Uncharacterized protein. (223 aa)
	LOC108433729	Proteasome subunit beta. (277 aa)
	LOC108433730	Proteasome subunit beta. (218 aa)
	ubfd1	Ubiquitin family domain containing 1. (280 aa)
	mpnd	MPN domain containing. (460 aa)
	psme2	Proteasome activator subunit 2. (239 aa)
	psmc5	Proteasome 26S subunit, ATPase 5; Belongs to the AAA ATPase family. (406 aa)
	LOC108443072	Proteasome 26S subunit, non-ATPase 13. (378 aa)
	LOC108443015	Proteasome endopeptidase complex. (230 aa)
	LOC108440756	Proteasome subunit alpha type. (234 aa)
	LOC108416395	PROTEASOME_ALPHA_1 domain-containing protein. (184 aa)
	psma5	Proteasome subunit alpha type. (280 aa)
	LOC108439060	Proteasome endopeptidase complex. (237 aa)
	psmc2	Proteasome 26S subunit, ATPase 2; Belongs to the AAA ATPase family. (433 aa)
	psma6	Proteasome subunit alpha type. (256 aa)
	ublcp1	Ubiquitin-like domain containing CTD phosphatase 1. (318 aa)
	psmd9	Proteasome 26S subunit, non-ATPase 9. (213 aa)
	psmc4	Proteasome 26S subunit, ATPase 4; Belongs to the AAA ATPase family. (418 aa)
	LOC108438927	Proteasome subunit beta. (273 aa)
	PSMD13	Proteasome 26S subunit, non-ATPase 13. (378 aa)
	psme3	Proteasome activator subunit 3. (237 aa)
	psmb6	Proteasome subunit beta. (224 aa)
	usp14	Ubiquitin carboxyl-terminal hydrolase. (493 aa)
	psmb1	Proteasome subunit beta. (237 aa)
	LOC108410945	Proteasome subunit beta. (278 aa)
	psmd10	Proteasome 26S subunit, non-ATPase 10. (226 aa)
	LOC108435551	Proteasome subunit beta11b. (369 aa)
	LOC108413249	Proteasome 26S subunit, non-ATPase 8. (280 aa)
	LOC108413250	Proteasome 26S subunit, non-ATPase 8. (280 aa)
	psma4	Proteasome subunit alpha type. (261 aa)
	psmc6	Proteasome 26S subunit, ATPase 6; Belongs to the AAA ATPase family. (389 aa)
	LOC108416288	Proteasome subunit alpha type. (251 aa)
	psme4	Proteasome activator subunit 4a. (1857 aa)
	uchl5	Ubiquitin carboxyl-terminal hydrolase. (329 aa)
	psmd12	Proteasome 26S subunit, non-ATPase 12. (456 aa)
	psma3	Proteasome subunit alpha type. (255 aa)
	psmb3	Proteasome subunit beta. (202 aa)
	LOC108442534	Proteasome 26S subunit, non-ATPase 11a. (421 aa)
	psmd1	26S proteasome non-ATPase regulatory subunit 1; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S1 family. (954 aa)
	psmd2	26S proteasome non-ATPase regulatory subunit 2; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S2 family. (899 aa)
	psmb8	Proteasome subunit beta. (271 aa)
	LOC108433731	Proteasome subunit beta. (216 aa)
	psma7	Proteasome subunit alpha type. (252 aa)
	ENSPNAP00000027750	PROTEASOME_ALPHA_1 domain-containing protein. (44 aa)
	psmd14	Proteasome 26S subunit, non-ATPase 14. (310 aa)
	psmd7	Proteasome 26S subunit, non-ATPase 7. (330 aa)
	psmd6	Proteasome 26S subunit, non-ATPase 6. (389 aa)
	LOC108439057	Proteasome subunit alpha type-1. (237 aa)
	psmd5	Proteasome 26S subunit, non-ATPase 5. (504 aa)
	LOC108438950	Uncharacterized protein. (358 aa)
	psmb2	Proteasome subunit beta. (197 aa)
	psmc3	Proteasome 26S subunit, ATPase 3; Belongs to the AAA ATPase family. (427 aa)
	psme1	Proteasome activator subunit 1. (250 aa)
	LOC108426507	Proteasome activator subunit 4b. (1804 aa)
	psmb4	Proteasome subunit beta; Belongs to the peptidase T1B family. (258 aa)
	LOC108415718	Proteasome subunit beta 7. (211 aa)

Your Current Organism:

Pygocentrus nattereri

NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPNAP00000003324	ENSPNAP00000027750	ENSPNAP00000003324	ENSPNAP00000027750	Uncharacterized protein.	PROTEASOME_ALPHA_1 domain-containing protein.	0.913
ENSPNAP00000003324	LOC108410945	ENSPNAP00000003324	ENSPNAP00000019152	Uncharacterized protein.	Proteasome subunit beta.	0.952
ENSPNAP00000003324	LOC108413249	ENSPNAP00000003324	ENSPNAP00000019777	Uncharacterized protein.	Proteasome 26S subunit, non-ATPase 8.	0.968
ENSPNAP00000003324	LOC108413250	ENSPNAP00000003324	ENSPNAP00000020051	Uncharacterized protein.	Proteasome 26S subunit, non-ATPase 8.	0.968
ENSPNAP00000003324	LOC108415718	ENSPNAP00000003324	ENSPNAP00000037350	Uncharacterized protein.	Proteasome subunit beta 7.	0.952
ENSPNAP00000003324	LOC108416288	ENSPNAP00000003324	ENSPNAP00000020641	Uncharacterized protein.	Proteasome subunit alpha type.	0.969
ENSPNAP00000003324	LOC108416395	ENSPNAP00000003324	ENSPNAP00000010486	Uncharacterized protein.	PROTEASOME_ALPHA_1 domain-containing protein.	0.936
ENSPNAP00000003324	LOC108425697	ENSPNAP00000003324	ENSPNAP00000002313	Uncharacterized protein.	Proteasome endopeptidase complex.	0.971
ENSPNAP00000003324	LOC108426450	ENSPNAP00000003324	ENSPNAP00000001757	Uncharacterized protein.	Proteasome 26S subunit, non-ATPase 11b.	0.988
ENSPNAP00000003324	LOC108426507	ENSPNAP00000003324	ENSPNAP00000036559	Uncharacterized protein.	Proteasome activator subunit 4b.	0.762
ENSPNAP00000003324	LOC108428647	ENSPNAP00000003324	ENSPNAP00000002318	Uncharacterized protein.	Proteasome 26S subunit, ATPase 1a; Belongs to the AAA ATPase family.	0.985
ENSPNAP00000003324	LOC108433729	ENSPNAP00000003324	ENSPNAP00000004250	Uncharacterized protein.	Proteasome subunit beta.	0.944
ENSPNAP00000003324	LOC108433730	ENSPNAP00000003324	ENSPNAP00000004292	Uncharacterized protein.	Proteasome subunit beta.	0.942
ENSPNAP00000003324	LOC108433731	ENSPNAP00000003324	ENSPNAP00000025575	Uncharacterized protein.	Proteasome subunit beta.	0.942
ENSPNAP00000003324	LOC108435551	ENSPNAP00000003324	ENSPNAP00000019680	Uncharacterized protein.	Proteasome subunit beta11b.	0.902
ENSPNAP00000003324	LOC108438927	ENSPNAP00000003324	ENSPNAP00000015844	Uncharacterized protein.	Proteasome subunit beta.	0.959
ENSPNAP00000003324	LOC108438950	ENSPNAP00000003324	ENSPNAP00000033354	Uncharacterized protein.	Uncharacterized protein.	0.902
ENSPNAP00000003324	LOC108439057	ENSPNAP00000003324	ENSPNAP00000030132	Uncharacterized protein.	Proteasome subunit alpha type-1.	0.977
ENSPNAP00000003324	LOC108439060	ENSPNAP00000003324	ENSPNAP00000010852	Uncharacterized protein.	Proteasome endopeptidase complex.	0.977
ENSPNAP00000003324	LOC108440756	ENSPNAP00000003324	ENSPNAP00000009782	Uncharacterized protein.	Proteasome subunit alpha type.	0.971