STRINGSTRING
bcas2 bcas2 cdc5l cdc5l prpf19 prpf19 plrg1 plrg1 LOC108413879 LOC108413879
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
bcas2BCAS2 pre-mRNA processing factor. (225 aa)
cdc5lCDC5 cell division cycle 5-like (S. pombe). (803 aa)
prpf19Pre-mRNA processing factor 19. (505 aa)
plrg1Pleiotropic regulator 1. (512 aa)
LOC108413879CWC15 spliceosome associated protein homolog. (189 aa)
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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