9 items (Pygocentrus nattereri) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSPNAP00000013234	Small nuclear ribonucleoprotein polypeptide F. (85 aa)
	prpf31	PRP31 pre-mRNA processing factor 31 homolog (yeast). (510 aa)
	snrpb	Small nuclear ribonucleoprotein-associated protein. (243 aa)
	snrpe	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (92 aa)
	snrpd3	Small nuclear ribonucleoprotein Sm D3. (143 aa)
	LOC108437378	Small nuclear ribonucleoprotein Sm D3. (128 aa)
	snrpd2	Small nuclear ribonucleoprotein Sm D2. (118 aa)
	snrpg	Small nuclear ribonucleoprotein G. (76 aa)
	snrpd1	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. (119 aa)

Your Current Organism:

Pygocentrus nattereri

NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPNAP00000013234	LOC108437378	ENSPNAP00000013234	ENSPNAP00000024183	Small nuclear ribonucleoprotein polypeptide F.	Small nuclear ribonucleoprotein Sm D3.	0.998
ENSPNAP00000013234	prpf31	ENSPNAP00000013234	ENSPNAP00000011837	Small nuclear ribonucleoprotein polypeptide F.	PRP31 pre-mRNA processing factor 31 homolog (yeast).	0.986
ENSPNAP00000013234	snrpb	ENSPNAP00000013234	ENSPNAP00000010529	Small nuclear ribonucleoprotein polypeptide F.	Small nuclear ribonucleoprotein-associated protein.	0.997
ENSPNAP00000013234	snrpd1	ENSPNAP00000013234	ENSPNAP00000012098	Small nuclear ribonucleoprotein polypeptide F.	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	0.999
ENSPNAP00000013234	snrpd2	ENSPNAP00000013234	ENSPNAP00000019039	Small nuclear ribonucleoprotein polypeptide F.	Small nuclear ribonucleoprotein Sm D2.	0.999
ENSPNAP00000013234	snrpd3	ENSPNAP00000013234	ENSPNAP00000004099	Small nuclear ribonucleoprotein polypeptide F.	Small nuclear ribonucleoprotein Sm D3.	0.998
ENSPNAP00000013234	snrpe	ENSPNAP00000013234	ENSPNAP00000007513	Small nuclear ribonucleoprotein polypeptide F.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.999
ENSPNAP00000013234	snrpg	ENSPNAP00000013234	ENSPNAP00000016325	Small nuclear ribonucleoprotein polypeptide F.	Small nuclear ribonucleoprotein G.	0.999
LOC108437378	ENSPNAP00000013234	ENSPNAP00000024183	ENSPNAP00000013234	Small nuclear ribonucleoprotein Sm D3.	Small nuclear ribonucleoprotein polypeptide F.	0.998
LOC108437378	prpf31	ENSPNAP00000024183	ENSPNAP00000011837	Small nuclear ribonucleoprotein Sm D3.	PRP31 pre-mRNA processing factor 31 homolog (yeast).	0.952
LOC108437378	snrpb	ENSPNAP00000024183	ENSPNAP00000010529	Small nuclear ribonucleoprotein Sm D3.	Small nuclear ribonucleoprotein-associated protein.	0.992
LOC108437378	snrpd1	ENSPNAP00000024183	ENSPNAP00000012098	Small nuclear ribonucleoprotein Sm D3.	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	0.998
LOC108437378	snrpd2	ENSPNAP00000024183	ENSPNAP00000019039	Small nuclear ribonucleoprotein Sm D3.	Small nuclear ribonucleoprotein Sm D2.	0.998
LOC108437378	snrpe	ENSPNAP00000024183	ENSPNAP00000007513	Small nuclear ribonucleoprotein Sm D3.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.998
LOC108437378	snrpg	ENSPNAP00000024183	ENSPNAP00000016325	Small nuclear ribonucleoprotein Sm D3.	Small nuclear ribonucleoprotein G.	0.998
prpf31	ENSPNAP00000013234	ENSPNAP00000011837	ENSPNAP00000013234	PRP31 pre-mRNA processing factor 31 homolog (yeast).	Small nuclear ribonucleoprotein polypeptide F.	0.986
prpf31	LOC108437378	ENSPNAP00000011837	ENSPNAP00000024183	PRP31 pre-mRNA processing factor 31 homolog (yeast).	Small nuclear ribonucleoprotein Sm D3.	0.952
prpf31	snrpb	ENSPNAP00000011837	ENSPNAP00000010529	PRP31 pre-mRNA processing factor 31 homolog (yeast).	Small nuclear ribonucleoprotein-associated protein.	0.919
prpf31	snrpd1	ENSPNAP00000011837	ENSPNAP00000012098	PRP31 pre-mRNA processing factor 31 homolog (yeast).	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	0.981
prpf31	snrpd2	ENSPNAP00000011837	ENSPNAP00000019039	PRP31 pre-mRNA processing factor 31 homolog (yeast).	Small nuclear ribonucleoprotein Sm D2.	0.979