24 items (Pygocentrus nattereri) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	snrnp70	Small nuclear ribonucleoprotein 70 (U1). (453 aa)
	ENSPNAP00000013234	Small nuclear ribonucleoprotein polypeptide F. (85 aa)
	rbmx	RNA binding motif protein X-linked. (386 aa)
	snrnp35	Small nuclear ribonucleoprotein 35 (U11/U12). (258 aa)
	sf3b6	Splicing factor 3b, subunit 6. (125 aa)
	sf3b1	Splicing factor 3b, subunit 1. (1315 aa)
	zmat5	Zinc finger, matrin-type 5. (174 aa)
	snrpg	Small nuclear ribonucleoprotein G. (76 aa)
	snrnp48	Small nuclear ribonucleoprotein 48 (U11/U12). (340 aa)
	zcrb1	Zinc finger CCHC-type and RNA binding motif 1. (218 aa)
	sf3b5	Splicing factor 3B subunit 5; Belongs to the SF3B5 family. (86 aa)
	rnpc3	RNA-binding region (RNP1, RRM) containing 3. (515 aa)
	sf3b4	Splicing factor 3b, subunit 4. (392 aa)
	LOC108437378	Small nuclear ribonucleoprotein Sm D3. (128 aa)
	lsm7	LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated. (103 aa)
	phf5a	PHD finger protein 5A. (110 aa)
	sf3b2	Splicing factor 3b, subunit 2. (882 aa)
	snrnp25	Small nuclear ribonucleoprotein 25. (179 aa)
	zrsr2	Zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2. (524 aa)
	dhx15	DEAH (Asp-Glu-Ala-His) box helicase 15. (764 aa)
	snrpd3	Small nuclear ribonucleoprotein Sm D3. (143 aa)
	pdcd7	Programmed cell death 7. (537 aa)
	rbm41	RNA binding motif protein 41. (446 aa)
	snrpd1	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. (119 aa)

Your Current Organism:

Pygocentrus nattereri

NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPNAP00000013234	LOC108437378	ENSPNAP00000013234	ENSPNAP00000024183	Small nuclear ribonucleoprotein polypeptide F.	Small nuclear ribonucleoprotein Sm D3.	0.998
ENSPNAP00000013234	dhx15	ENSPNAP00000013234	ENSPNAP00000003860	Small nuclear ribonucleoprotein polypeptide F.	DEAH (Asp-Glu-Ala-His) box helicase 15.	0.985
ENSPNAP00000013234	lsm7	ENSPNAP00000013234	ENSPNAP00000025185	Small nuclear ribonucleoprotein polypeptide F.	LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.	0.997
ENSPNAP00000013234	pdcd7	ENSPNAP00000013234	ENSPNAP00000007305	Small nuclear ribonucleoprotein polypeptide F.	Programmed cell death 7.	0.805
ENSPNAP00000013234	phf5a	ENSPNAP00000013234	ENSPNAP00000026214	Small nuclear ribonucleoprotein polypeptide F.	PHD finger protein 5A.	0.996
ENSPNAP00000013234	rbm41	ENSPNAP00000013234	ENSPNAP00000010047	Small nuclear ribonucleoprotein polypeptide F.	RNA binding motif protein 41.	0.958
ENSPNAP00000013234	rbmx	ENSPNAP00000013234	ENSPNAP00000013776	Small nuclear ribonucleoprotein polypeptide F.	RNA binding motif protein X-linked.	0.673
ENSPNAP00000013234	rnpc3	ENSPNAP00000013234	ENSPNAP00000023324	Small nuclear ribonucleoprotein polypeptide F.	RNA-binding region (RNP1, RRM) containing 3.	0.963
ENSPNAP00000013234	sf3b1	ENSPNAP00000013234	ENSPNAP00000001630	Small nuclear ribonucleoprotein polypeptide F.	Splicing factor 3b, subunit 1.	0.991
ENSPNAP00000013234	sf3b2	ENSPNAP00000013234	ENSPNAP00000026414	Small nuclear ribonucleoprotein polypeptide F.	Splicing factor 3b, subunit 2.	0.984
ENSPNAP00000013234	sf3b4	ENSPNAP00000013234	ENSPNAP00000023573	Small nuclear ribonucleoprotein polypeptide F.	Splicing factor 3b, subunit 4.	0.980
ENSPNAP00000013234	sf3b5	ENSPNAP00000013234	ENSPNAP00000022040	Small nuclear ribonucleoprotein polypeptide F.	Splicing factor 3B subunit 5; Belongs to the SF3B5 family.	0.989
ENSPNAP00000013234	sf3b6	ENSPNAP00000013234	ENSPNAP00000002460	Small nuclear ribonucleoprotein polypeptide F.	Splicing factor 3b, subunit 6.	0.984
ENSPNAP00000013234	snrnp25	ENSPNAP00000013234	ENSPNAP00000026766	Small nuclear ribonucleoprotein polypeptide F.	Small nuclear ribonucleoprotein 25.	0.740
ENSPNAP00000013234	snrnp35	ENSPNAP00000013234	ENSPNAP00000014647	Small nuclear ribonucleoprotein polypeptide F.	Small nuclear ribonucleoprotein 35 (U11/U12).	0.976
ENSPNAP00000013234	snrnp48	ENSPNAP00000013234	ENSPNAP00000016636	Small nuclear ribonucleoprotein polypeptide F.	Small nuclear ribonucleoprotein 48 (U11/U12).	0.957
ENSPNAP00000013234	snrnp70	ENSPNAP00000013234	ENSPNAP00000011757	Small nuclear ribonucleoprotein polypeptide F.	Small nuclear ribonucleoprotein 70 (U1).	0.976
ENSPNAP00000013234	snrpd1	ENSPNAP00000013234	ENSPNAP00000012098	Small nuclear ribonucleoprotein polypeptide F.	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	0.999
ENSPNAP00000013234	snrpd3	ENSPNAP00000013234	ENSPNAP00000004099	Small nuclear ribonucleoprotein polypeptide F.	Small nuclear ribonucleoprotein Sm D3.	0.998
ENSPNAP00000013234	snrpg	ENSPNAP00000013234	ENSPNAP00000016325	Small nuclear ribonucleoprotein polypeptide F.	Small nuclear ribonucleoprotein G.	0.999