STRINGSTRING
LOC108438731 LOC108438731 phax phax LOC108425876 LOC108425876 LOC108435409 LOC108435409 gemin4 gemin4 dkc1 dkc1 eaf1 eaf1 ddx46 ddx46 prpf3 prpf3 ice1 ice1 sart1 sart1 eftud2 eftud2 hinfp hinfp wrap53 wrap53 LOC108435289 LOC108435289 frg1 frg1 oip5 oip5 ewsr1 ewsr1 ice2 ice2 LOC108426214 LOC108426214 coil coil xpo1 xpo1 prpf31 prpf31 hspb7 hspb7 fbl fbl toe1 toe1 nop58 nop58 nolc1 nolc1 prpf4 prpf4 zpr1 zpr1 LOC108436634 LOC108436634 uspl1 uspl1 sart3 sart3 fam118b fam118b lsg1 lsg1 ENSPNAP00000029918 ENSPNAP00000029918 tgs1 tgs1 ak6 ak6 smndc1 smndc1 LSM10 LSM10
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC108438731Exportin 1 (CRM1 homolog, yeast) b. (1071 aa)
phaxPhosphorylated adaptor for RNA export. (399 aa)
LOC108425876Nuclear protein, ataxia-telangiectasia locus. (1335 aa)
LOC108435409EWS RNA-binding protein 1a. (643 aa)
gemin4Gem (nuclear organelle) associated protein 4. (1067 aa)
dkc1Dyskeratosis congenita 1, dyskerin. (521 aa)
eaf1ELL associated factor 1. (258 aa)
ddx46DEAD (Asp-Glu-Ala-Asp) box polypeptide 46. (1029 aa)
prpf3PRP3 pre-mRNA processing factor 3 homolog (yeast). (708 aa)
ice1KIAA0947-like (H. sapiens). (1518 aa)
sart1Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP. (785 aa)
eftud2Elongation factor Tu GTP binding domain containing 2. (971 aa)
hinfpHistone H4 transcription factor. (489 aa)
wrap53WD repeat containing, antisense to TP53. (541 aa)
LOC108435289Zgc:112083. (497 aa)
frg1FSHD region gene 1. (242 aa)
oip5Opa interacting protein 5. (214 aa)
ewsr1EWS RNA-binding protein 1b. (509 aa)
ice2Interactor of little elongator complex ELL subunit 2. (855 aa)
LOC108426214Survival of motor neuron 1, telomeric. (318 aa)
coilCoilin p80. (523 aa)
xpo1Exportin 1 (CRM1 homolog, yeast) a. (1071 aa)
prpf31PRP31 pre-mRNA processing factor 31 homolog (yeast). (510 aa)
hspb7Heat shock protein family, member 7 (cardiovascular); Belongs to the small heat shock protein (HSP20) family. (166 aa)
fblFibrillarin. (330 aa)
toe1Target of EGR1, exonuclease. (516 aa)
nop58NOP58 ribonucleoprotein homolog (yeast). (564 aa)
nolc1Nucleolar and coiled-body phosphoprotein 1. (944 aa)
prpf4PRP4 pre-mRNA processing factor 4 homolog (yeast). (507 aa)
zpr1ZPR1 zinc finger. (443 aa)
LOC108436634Zgc:103482. (351 aa)
uspl1Ubiquitin specific peptidase like 1. (962 aa)
sart3Spliceosome associated factor 3, U4/U6 recycling protein. (953 aa)
fam118bFamily with sequence similarity 118 member B. (334 aa)
lsg1Large 60S subunit nuclear export GTPase 1. (637 aa)
ENSPNAP00000029918SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family. (146 aa)
tgs1LYN proto-oncogene, Src family tyrosine kinase. (817 aa)
ak6Adenylate kinase isoenzyme 6; Broad-specificity nucleoside monophosphate (NMP) kinase that catalyzes the reversible transfer of the terminal phosphate group between nucleoside triphosphates and monophosphates. May have a role in nuclear energy homeostasis. Has also ATPase activity. May be involved in regulation of Cajal body (CB) formation; Belongs to the adenylate kinase family. AK6 subfamily. (174 aa)
smndc1Survival motor neuron domain containing 1. (237 aa)
LSM10LSM10, U7 small nuclear RNA associated. (120 aa)
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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