STRINGSTRING
lss lss ENSPNAP00000000997 ENSPNAP00000000997 LOC108427280 LOC108427280 LOC108436856 LOC108436856 fdps fdps LOC108426594 LOC108426594 LOC108442846 LOC108442846 LOC108435720 LOC108435720 LOC108425053 LOC108425053 LOC108412614 LOC108412614 ENSPNAP00000016347 ENSPNAP00000016347
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
lssTerpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family. (757 aa)
ENSPNAP00000000997Geranylgeranyl diphosphate synthase 1; Belongs to the FPP/GGPP synthase family. (298 aa)
LOC1084272803-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase. (552 aa)
LOC108436856Retinoid isomerohydrolase RPE65 a. (531 aa)
fdpsUncharacterized protein; Belongs to the FPP/GGPP synthase family. (354 aa)
LOC108426594Retinol dehydrogenase 10a; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (336 aa)
LOC108442846Retinol binding protein 1, cellular, tandem duplicate 1; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. (172 aa)
LOC108435720Retinol dehydrogenase 10b; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (336 aa)
LOC108425053Retinoid isomerohydrolase RPE65 b. (532 aa)
LOC108412614RUN and SH3 domain containing 2. (1674 aa)
ENSPNAP00000016347RUN domain-containing protein. (85 aa)
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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