6 items (Pygocentrus nattereri) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC108425220	Interleukin-1. (275 aa)
	ENSPNAP00000012490	TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family. (61 aa)
	LOC108413415	Src kinase associated phosphoprotein 1. (370 aa)
	LOC108425141	Interleukin-1. (277 aa)
	LOC108425221	Interleukin-1. (277 aa)
	fgb	Fibrinogen beta chain. (490 aa)

Your Current Organism:

Pygocentrus nattereri

NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPNAP00000012490	LOC108425141	ENSPNAP00000012490	ENSPNAP00000004196	TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family.	Interleukin-1.	0.732
ENSPNAP00000012490	LOC108425220	ENSPNAP00000012490	ENSPNAP00000005846	TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family.	Interleukin-1.	0.732
ENSPNAP00000012490	LOC108425221	ENSPNAP00000012490	ENSPNAP00000005086	TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family.	Interleukin-1.	0.732
LOC108425141	ENSPNAP00000012490	ENSPNAP00000004196	ENSPNAP00000012490	Interleukin-1.	TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family.	0.732
LOC108425220	ENSPNAP00000012490	ENSPNAP00000005846	ENSPNAP00000012490	Interleukin-1.	TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family.	0.732
LOC108425221	ENSPNAP00000012490	ENSPNAP00000005086	ENSPNAP00000012490	Interleukin-1.	TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family.	0.732