STRINGSTRING
LOC108425220 LOC108425220 ENSPNAP00000012490 ENSPNAP00000012490 LOC108425141 LOC108425141 vegfc vegfc LOC108425221 LOC108425221 mecp2 mecp2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC108425220Interleukin-1. (275 aa)
ENSPNAP00000012490TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family. (61 aa)
LOC108425141Interleukin-1. (277 aa)
vegfcVascular endothelial growth factor c; Belongs to the PDGF/VEGF growth factor family. (404 aa)
LOC108425221Interleukin-1. (277 aa)
mecp2Methyl CpG binding protein 2. (553 aa)
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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