27 items (Pygocentrus nattereri) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	sec16a	Protein transport protein sec16; Plays a role in the organization of the endoplasmic reticulum exit sites (ERES), also known as transitional endoplasmic reticulum (tER). Required for secretory cargo traffic from the endoplasmic reticulum to the Golgi apparatus. (2040 aa)
	pef1	Penta-EF-hand domain containing 1. (304 aa)
	ENSPNAP00000031760	Uncharacterized protein. (186 aa)
	LOC108428259	Cullin 3a; Belongs to the cullin family. (712 aa)
	LOC108434542	SEC24 homolog B, COPII coat complex component. (1203 aa)
	tbc1d20	TBC1 domain family, member 20. (403 aa)
	sec23a	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (765 aa)
	sec16b	Protein transport protein sec16; Plays a role in the organization of the endoplasmic reticulum exit sites (ERES), also known as transitional endoplasmic reticulum (tER). Required for secretory cargo traffic from the endoplasmic reticulum to the Golgi apparatus. (973 aa)
	LOC108444314	Si:dkey-13n15.2. (903 aa)
	LOC108436419	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (766 aa)
	LOC108429636	Zgc:63863. (404 aa)
	scap	SREBF chaperone. (1226 aa)
	KLHL12	Kelch like family member 12. (602 aa)
	LOC108434601	Si:dkey-9k7.3. (613 aa)
	ENSPNAP00000015027	Uncharacterized protein. (203 aa)
	sec24c	SEC24 homolog C, COPII coat complex component. (1252 aa)
	sec13	SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family. (320 aa)
	pdcd6	Programmed cell death 6. (184 aa)
	ENSPNAP00000023650	Uncharacterized protein. (139 aa)
	cul3	Cullin 3b; Belongs to the cullin family. (767 aa)
	tfg	Trafficking from ER to golgi regulator. (394 aa)
	sec24d	SEC24 homolog D, COPII coat complex component. (1038 aa)
	preb	Prolactin regulatory element binding. (704 aa)
	SEC24A	SEC24 homolog A, COPII coat complex component. (1073 aa)
	sec31a	SEC31 homolog A, COPII coat complex component. (1339 aa)
	LOC108441295	BTB domain-containing protein. (571 aa)
	sec31b	SEC31 homolog B, COPII coat complex component. (1100 aa)

Your Current Organism:

Pygocentrus nattereri

NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPNAP00000015027	LOC108434542	ENSPNAP00000015027	ENSPNAP00000033692	Uncharacterized protein.	SEC24 homolog B, COPII coat complex component.	0.888
ENSPNAP00000015027	LOC108434601	ENSPNAP00000015027	ENSPNAP00000014707	Uncharacterized protein.	Si:dkey-9k7.3.	0.856
ENSPNAP00000015027	LOC108436419	ENSPNAP00000015027	ENSPNAP00000005147	Uncharacterized protein.	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	0.890
ENSPNAP00000015027	LOC108444314	ENSPNAP00000015027	ENSPNAP00000004822	Uncharacterized protein.	Si:dkey-13n15.2.	0.870
ENSPNAP00000015027	SEC24A	ENSPNAP00000015027	ENSPNAP00000028826	Uncharacterized protein.	SEC24 homolog A, COPII coat complex component.	0.888
ENSPNAP00000015027	preb	ENSPNAP00000015027	ENSPNAP00000026454	Uncharacterized protein.	Prolactin regulatory element binding.	0.521
ENSPNAP00000015027	sec13	ENSPNAP00000015027	ENSPNAP00000018378	Uncharacterized protein.	SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family.	0.954
ENSPNAP00000015027	sec23a	ENSPNAP00000015027	ENSPNAP00000001986	Uncharacterized protein.	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	0.890
ENSPNAP00000015027	sec24c	ENSPNAP00000015027	ENSPNAP00000016405	Uncharacterized protein.	SEC24 homolog C, COPII coat complex component.	0.889
ENSPNAP00000015027	sec24d	ENSPNAP00000015027	ENSPNAP00000025521	Uncharacterized protein.	SEC24 homolog D, COPII coat complex component.	0.889
ENSPNAP00000015027	sec31a	ENSPNAP00000015027	ENSPNAP00000030071	Uncharacterized protein.	SEC31 homolog A, COPII coat complex component.	0.849
ENSPNAP00000015027	sec31b	ENSPNAP00000015027	ENSPNAP00000031238	Uncharacterized protein.	SEC31 homolog B, COPII coat complex component.	0.849
ENSPNAP00000015027	tfg	ENSPNAP00000015027	ENSPNAP00000000994	Uncharacterized protein.	Trafficking from ER to golgi regulator.	0.750
ENSPNAP00000023650	ENSPNAP00000031760	ENSPNAP00000023650	ENSPNAP00000031760	Uncharacterized protein.	Uncharacterized protein.	0.507
ENSPNAP00000023650	LOC108434542	ENSPNAP00000023650	ENSPNAP00000033692	Uncharacterized protein.	SEC24 homolog B, COPII coat complex component.	0.888
ENSPNAP00000023650	LOC108434601	ENSPNAP00000023650	ENSPNAP00000014707	Uncharacterized protein.	Si:dkey-9k7.3.	0.856
ENSPNAP00000023650	LOC108436419	ENSPNAP00000023650	ENSPNAP00000005147	Uncharacterized protein.	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	0.890
ENSPNAP00000023650	LOC108444314	ENSPNAP00000023650	ENSPNAP00000004822	Uncharacterized protein.	Si:dkey-13n15.2.	0.870
ENSPNAP00000023650	SEC24A	ENSPNAP00000023650	ENSPNAP00000028826	Uncharacterized protein.	SEC24 homolog A, COPII coat complex component.	0.888
ENSPNAP00000023650	preb	ENSPNAP00000023650	ENSPNAP00000026454	Uncharacterized protein.	Prolactin regulatory element binding.	0.521