6 items (Pygocentrus nattereri) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	snrpe	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (92 aa)
	LOC108437378	Small nuclear ribonucleoprotein Sm D3. (128 aa)
	snrpg	Small nuclear ribonucleoprotein G. (76 aa)
	snrpd1	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. (119 aa)
	snrpb	Small nuclear ribonucleoprotein-associated protein. (243 aa)
	snrpd3	Small nuclear ribonucleoprotein Sm D3. (143 aa)

Your Current Organism:

Pygocentrus nattereri

NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC108437378	snrpb	ENSPNAP00000024183	ENSPNAP00000010529	Small nuclear ribonucleoprotein Sm D3.	Small nuclear ribonucleoprotein-associated protein.	0.992
LOC108437378	snrpd1	ENSPNAP00000024183	ENSPNAP00000012098	Small nuclear ribonucleoprotein Sm D3.	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	0.998
LOC108437378	snrpe	ENSPNAP00000024183	ENSPNAP00000007513	Small nuclear ribonucleoprotein Sm D3.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.998
LOC108437378	snrpg	ENSPNAP00000024183	ENSPNAP00000016325	Small nuclear ribonucleoprotein Sm D3.	Small nuclear ribonucleoprotein G.	0.998
snrpb	LOC108437378	ENSPNAP00000010529	ENSPNAP00000024183	Small nuclear ribonucleoprotein-associated protein.	Small nuclear ribonucleoprotein Sm D3.	0.992
snrpb	snrpd1	ENSPNAP00000010529	ENSPNAP00000012098	Small nuclear ribonucleoprotein-associated protein.	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	0.997
snrpb	snrpd3	ENSPNAP00000010529	ENSPNAP00000004099	Small nuclear ribonucleoprotein-associated protein.	Small nuclear ribonucleoprotein Sm D3.	0.992
snrpb	snrpe	ENSPNAP00000010529	ENSPNAP00000007513	Small nuclear ribonucleoprotein-associated protein.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.998
snrpb	snrpg	ENSPNAP00000010529	ENSPNAP00000016325	Small nuclear ribonucleoprotein-associated protein.	Small nuclear ribonucleoprotein G.	0.996
snrpd1	LOC108437378	ENSPNAP00000012098	ENSPNAP00000024183	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	Small nuclear ribonucleoprotein Sm D3.	0.998
snrpd1	snrpb	ENSPNAP00000012098	ENSPNAP00000010529	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	Small nuclear ribonucleoprotein-associated protein.	0.997
snrpd1	snrpd3	ENSPNAP00000012098	ENSPNAP00000004099	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	Small nuclear ribonucleoprotein Sm D3.	0.998
snrpd1	snrpe	ENSPNAP00000012098	ENSPNAP00000007513	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.999
snrpd1	snrpg	ENSPNAP00000012098	ENSPNAP00000016325	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	Small nuclear ribonucleoprotein G.	0.999
snrpd3	snrpb	ENSPNAP00000004099	ENSPNAP00000010529	Small nuclear ribonucleoprotein Sm D3.	Small nuclear ribonucleoprotein-associated protein.	0.992
snrpd3	snrpd1	ENSPNAP00000004099	ENSPNAP00000012098	Small nuclear ribonucleoprotein Sm D3.	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	0.998
snrpd3	snrpe	ENSPNAP00000004099	ENSPNAP00000007513	Small nuclear ribonucleoprotein Sm D3.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.998
snrpd3	snrpg	ENSPNAP00000004099	ENSPNAP00000016325	Small nuclear ribonucleoprotein Sm D3.	Small nuclear ribonucleoprotein G.	0.998
snrpe	LOC108437378	ENSPNAP00000007513	ENSPNAP00000024183	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	Small nuclear ribonucleoprotein Sm D3.	0.998
snrpe	snrpb	ENSPNAP00000007513	ENSPNAP00000010529	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	Small nuclear ribonucleoprotein-associated protein.	0.998