5 items (Pygocentrus nattereri) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	snrpd1	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. (119 aa)
	clns1a	Chloride channel, nucleotide-sensitive, 1A. (233 aa)
	CLNS1A	Uncharacterized protein. (247 aa)
	snrpd3	Small nuclear ribonucleoprotein Sm D3. (143 aa)
	LOC108437378	Small nuclear ribonucleoprotein Sm D3. (128 aa)

Your Current Organism:

Pygocentrus nattereri

NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CLNS1A	LOC108437378	ENSPNAP00000036706	ENSPNAP00000024183	Uncharacterized protein.	Small nuclear ribonucleoprotein Sm D3.	0.913
CLNS1A	clns1a	ENSPNAP00000036706	ENSPNAP00000031152	Uncharacterized protein.	Chloride channel, nucleotide-sensitive, 1A.	0.922
CLNS1A	snrpd1	ENSPNAP00000036706	ENSPNAP00000012098	Uncharacterized protein.	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	0.978
CLNS1A	snrpd3	ENSPNAP00000036706	ENSPNAP00000004099	Uncharacterized protein.	Small nuclear ribonucleoprotein Sm D3.	0.913
LOC108437378	CLNS1A	ENSPNAP00000024183	ENSPNAP00000036706	Small nuclear ribonucleoprotein Sm D3.	Uncharacterized protein.	0.913
LOC108437378	clns1a	ENSPNAP00000024183	ENSPNAP00000031152	Small nuclear ribonucleoprotein Sm D3.	Chloride channel, nucleotide-sensitive, 1A.	0.935
LOC108437378	snrpd1	ENSPNAP00000024183	ENSPNAP00000012098	Small nuclear ribonucleoprotein Sm D3.	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	0.998
clns1a	CLNS1A	ENSPNAP00000031152	ENSPNAP00000036706	Chloride channel, nucleotide-sensitive, 1A.	Uncharacterized protein.	0.922
clns1a	LOC108437378	ENSPNAP00000031152	ENSPNAP00000024183	Chloride channel, nucleotide-sensitive, 1A.	Small nuclear ribonucleoprotein Sm D3.	0.935
clns1a	snrpd1	ENSPNAP00000031152	ENSPNAP00000012098	Chloride channel, nucleotide-sensitive, 1A.	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	0.979
clns1a	snrpd3	ENSPNAP00000031152	ENSPNAP00000004099	Chloride channel, nucleotide-sensitive, 1A.	Small nuclear ribonucleoprotein Sm D3.	0.935
snrpd1	CLNS1A	ENSPNAP00000012098	ENSPNAP00000036706	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	Uncharacterized protein.	0.978
snrpd1	LOC108437378	ENSPNAP00000012098	ENSPNAP00000024183	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	Small nuclear ribonucleoprotein Sm D3.	0.998
snrpd1	clns1a	ENSPNAP00000012098	ENSPNAP00000031152	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	Chloride channel, nucleotide-sensitive, 1A.	0.979
snrpd1	snrpd3	ENSPNAP00000012098	ENSPNAP00000004099	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	Small nuclear ribonucleoprotein Sm D3.	0.998
snrpd3	CLNS1A	ENSPNAP00000004099	ENSPNAP00000036706	Small nuclear ribonucleoprotein Sm D3.	Uncharacterized protein.	0.913
snrpd3	clns1a	ENSPNAP00000004099	ENSPNAP00000031152	Small nuclear ribonucleoprotein Sm D3.	Chloride channel, nucleotide-sensitive, 1A.	0.935
snrpd3	snrpd1	ENSPNAP00000004099	ENSPNAP00000012098	Small nuclear ribonucleoprotein Sm D3.	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	0.998