STRINGSTRING
sec16b sec16b sec16a sec16a LOC108434601 LOC108434601 ENSPNAP00000015027 ENSPNAP00000015027 plpp3 plpp3 ENSPNAP00000023650 ENSPNAP00000023650 LOC108441957 LOC108441957 preb preb sec31a sec31a ENSPNAP00000031760 ENSPNAP00000031760 pdcd6ip pdcd6ip tfg tfg sec23a sec23a
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
sec16bProtein transport protein sec16; Plays a role in the organization of the endoplasmic reticulum exit sites (ERES), also known as transitional endoplasmic reticulum (tER). Required for secretory cargo traffic from the endoplasmic reticulum to the Golgi apparatus. (973 aa)
sec16aProtein transport protein sec16; Plays a role in the organization of the endoplasmic reticulum exit sites (ERES), also known as transitional endoplasmic reticulum (tER). Required for secretory cargo traffic from the endoplasmic reticulum to the Golgi apparatus. (2040 aa)
LOC108434601Si:dkey-9k7.3. (613 aa)
ENSPNAP00000015027Uncharacterized protein. (203 aa)
plpp3Phospholipid phosphatase 3. (313 aa)
ENSPNAP00000023650Uncharacterized protein. (139 aa)
LOC108441957acidPPc domain-containing protein. (309 aa)
prebProlactin regulatory element binding. (704 aa)
sec31aSEC31 homolog A, COPII coat complex component. (1339 aa)
ENSPNAP00000031760Uncharacterized protein. (186 aa)
pdcd6ipProgrammed cell death 6 interacting protein. (873 aa)
tfgTrafficking from ER to golgi regulator. (394 aa)
sec23aProtein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (765 aa)
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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