9 items (Malassezia restricta) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Arpc4	Actin-related protein 2/3 complex subunit 4; Functions as actin-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. Seems to contact the mother actin filament; Belongs to the ARPC4 family. (168 aa)
	cap1	Adenylyl cyclase-associated protein; Belongs to the CAP family. (491 aa)
	act2	Actin-related protein 3; Belongs to the actin family. (436 aa)
	BNI1	Protein BNI1. (1640 aa)
	DNF11_3033	Uncharacterized protein. (1002 aa)
	COF1	Cofilin; Belongs to the actin-binding proteins ADF family. (139 aa)
	DNF11_1132	WH2 domain-containing protein. (355 aa)
	arc2	Arp2/3 complex 34 kDa subunit; Functions as actin-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. (309 aa)
	DNF11_0108	Uncharacterized protein. (588 aa)

Your Current Organism:

Malassezia restricta

NCBI taxonomy Id: 425264
Other names: M. restricta CBS 7877, Malassezia restricta CBS 7877

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Arpc4	DNF11_1132	A0A3G2RZF6	A0A3G2S451	Actin-related protein 2/3 complex subunit 4; Functions as actin-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. Seems to contact the mother actin filament; Belongs to the ARPC4 family.	WH2 domain-containing protein.	0.957
Arpc4	act2	A0A3G2RZF6	A0A3G2SBB3	Actin-related protein 2/3 complex subunit 4; Functions as actin-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. Seems to contact the mother actin filament; Belongs to the ARPC4 family.	Actin-related protein 3; Belongs to the actin family.	0.999
Arpc4	arc2	A0A3G2RZF6	A0A3G2S3Q0	Actin-related protein 2/3 complex subunit 4; Functions as actin-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. Seems to contact the mother actin filament; Belongs to the ARPC4 family.	Arp2/3 complex 34 kDa subunit; Functions as actin-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks.	0.999
BNI1	DNF11_1132	A0A3G2SAF4	A0A3G2S451	Protein BNI1.	WH2 domain-containing protein.	0.423
COF1	DNF11_0108	A0A3G2S6X1	A0A3G2S1P4	Cofilin; Belongs to the actin-binding proteins ADF family.	Uncharacterized protein.	0.850
COF1	DNF11_1132	A0A3G2S6X1	A0A3G2S451	Cofilin; Belongs to the actin-binding proteins ADF family.	WH2 domain-containing protein.	0.599
COF1	DNF11_3033	A0A3G2S6X1	A0A3G2S7F8	Cofilin; Belongs to the actin-binding proteins ADF family.	Uncharacterized protein.	0.670
COF1	act2	A0A3G2S6X1	A0A3G2SBB3	Cofilin; Belongs to the actin-binding proteins ADF family.	Actin-related protein 3; Belongs to the actin family.	0.778
COF1	arc2	A0A3G2S6X1	A0A3G2S3Q0	Cofilin; Belongs to the actin-binding proteins ADF family.	Arp2/3 complex 34 kDa subunit; Functions as actin-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks.	0.448
COF1	cap1	A0A3G2S6X1	A0A3G2SC86	Cofilin; Belongs to the actin-binding proteins ADF family.	Adenylyl cyclase-associated protein; Belongs to the CAP family.	0.947
DNF11_0108	COF1	A0A3G2S1P4	A0A3G2S6X1	Uncharacterized protein.	Cofilin; Belongs to the actin-binding proteins ADF family.	0.850
DNF11_0108	DNF11_3033	A0A3G2S1P4	A0A3G2S7F8	Uncharacterized protein.	Uncharacterized protein.	0.482
DNF11_0108	act2	A0A3G2S1P4	A0A3G2SBB3	Uncharacterized protein.	Actin-related protein 3; Belongs to the actin family.	0.778
DNF11_0108	cap1	A0A3G2S1P4	A0A3G2SC86	Uncharacterized protein.	Adenylyl cyclase-associated protein; Belongs to the CAP family.	0.679
DNF11_1132	Arpc4	A0A3G2S451	A0A3G2RZF6	WH2 domain-containing protein.	Actin-related protein 2/3 complex subunit 4; Functions as actin-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. Seems to contact the mother actin filament; Belongs to the ARPC4 family.	0.957
DNF11_1132	BNI1	A0A3G2S451	A0A3G2SAF4	WH2 domain-containing protein.	Protein BNI1.	0.423
DNF11_1132	COF1	A0A3G2S451	A0A3G2S6X1	WH2 domain-containing protein.	Cofilin; Belongs to the actin-binding proteins ADF family.	0.599
DNF11_1132	act2	A0A3G2S451	A0A3G2SBB3	WH2 domain-containing protein.	Actin-related protein 3; Belongs to the actin family.	0.982
DNF11_1132	arc2	A0A3G2S451	A0A3G2S3Q0	WH2 domain-containing protein.	Arp2/3 complex 34 kDa subunit; Functions as actin-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks.	0.962
DNF11_3033	COF1	A0A3G2S7F8	A0A3G2S6X1	Uncharacterized protein.	Cofilin; Belongs to the actin-binding proteins ADF family.	0.670