STRINGSTRING
crk1 crk1 BUD6 BUD6 CAPZB CAPZB tbp1_1 tbp1_1 clr3 clr3 CDC14 CDC14 DNF11_1132 DNF11_1132 SNX4 SNX4 MYO1 MYO1 PSMC4 PSMC4 Pros45 Pros45 plo1 plo1 rpt4 rpt4 POB3 POB3 gap1 gap1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
crk1Serine/threonine-protein kinase crk1; Belongs to the protein kinase superfamily. (369 aa)
BUD6Bud site selection protein 6. (841 aa)
CAPZBF-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments. (284 aa)
tbp1_126S protease regulatory subunit 6A; Belongs to the AAA ATPase family. (427 aa)
clr3Histone deacetylase clr3. (642 aa)
CDC14Tyrosine-protein phosphatase CDC14. (617 aa)
DNF11_1132WH2 domain-containing protein. (355 aa)
SNX4Sorting nexin-4. (492 aa)
MYO1Myosin-1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1252 aa)
PSMC426S protease regulatory subunit 6B; Belongs to the AAA ATPase family. (409 aa)
Pros4526S protease regulatory subunit 8; Belongs to the AAA ATPase family. (416 aa)
plo1Serine/threonine-protein kinase. (810 aa)
rpt4Putative 26S protease subunit rpt4; Belongs to the AAA ATPase family. (390 aa)
POB3FACT complex subunit POB3; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of [...] (574 aa)
gap1GTPase-activating protein. (747 aa)
Your Current Organism:
Malassezia restricta
NCBI taxonomy Id: 425264
Other names: M. restricta CBS 7877, Malassezia restricta CBS 7877
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