Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SES63948.1 | SET23592.1 | SAMN05660297_00037 | SAMN05660297_01780 | Ribonuclease HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | DNA polymerase III, delta prime subunit. | 0.533 |
| SES63948.1 | SET41957.1 | SAMN05660297_00037 | SAMN05660297_02349 | Ribonuclease HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | DNA polymerase III, delta subunit. | 0.607 |
| SES63948.1 | SET46899.1 | SAMN05660297_00037 | SAMN05660297_02504 | Ribonuclease HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | DNA polymerase III catalytic subunit, DnaE type. | 0.614 |
| SES63948.1 | SET59862.1 | SAMN05660297_00037 | SAMN05660297_02890 | Ribonuclease HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | Single-strand binding protein family protein. | 0.736 |
| SES63948.1 | SET72253.1 | SAMN05660297_00037 | SAMN05660297_03276 | Ribonuclease HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.635 |
| SES63948.1 | SET75405.1 | SAMN05660297_00037 | SAMN05660297_03392 | Ribonuclease HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | Single-strand binding protein. | 0.736 |
| SES63948.1 | dnaX | SAMN05660297_00037 | SAMN05660297_03256 | Ribonuclease HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | DNA polymerase-3 subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.533 |
| SES63948.1 | polA | SAMN05660297_00037 | SAMN05660297_03407 | Ribonuclease HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.949 |
| SES63948.1 | rnhB | SAMN05660297_00037 | SAMN05660297_00176 | Ribonuclease HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | RNase HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.817 |
| SES67074.1 | rnhB | SAMN05660297_00177 | SAMN05660297_00176 | Putative endonuclease; Belongs to the UPF0102 family. | RNase HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.801 |
| SES72857.1 | SET23592.1 | SAMN05660297_00415 | SAMN05660297_01780 | Putative ATPase. | DNA polymerase III, delta prime subunit. | 0.490 |
| SES72857.1 | SET72253.1 | SAMN05660297_00415 | SAMN05660297_03276 | Putative ATPase. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.605 |
| SES72857.1 | polA | SAMN05660297_00415 | SAMN05660297_03407 | Putative ATPase. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.695 |
| SES96246.1 | SET59862.1 | SAMN05660297_01023 | SAMN05660297_02890 | Peptidyl-prolyl cis-trans isomerase C. | Single-strand binding protein family protein. | 0.424 |
| SET01786.1 | SET23592.1 | SAMN05660297_01214 | SAMN05660297_01780 | Primary replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. | DNA polymerase III, delta prime subunit. | 0.741 |
| SET01786.1 | SET41957.1 | SAMN05660297_01214 | SAMN05660297_02349 | Primary replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. | DNA polymerase III, delta subunit. | 0.411 |
| SET01786.1 | SET46899.1 | SAMN05660297_01214 | SAMN05660297_02504 | Primary replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. | DNA polymerase III catalytic subunit, DnaE type. | 0.573 |
| SET01786.1 | SET51582.1 | SAMN05660297_01214 | SAMN05660297_02629 | Primary replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. | Protein of unknown function. | 0.920 |
| SET01786.1 | SET59862.1 | SAMN05660297_01214 | SAMN05660297_02890 | Primary replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. | Single-strand binding protein family protein. | 0.461 |
| SET01786.1 | SET72253.1 | SAMN05660297_01214 | SAMN05660297_03276 | Primary replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.551 |
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