Your Input: | |
| | ACB25557.1 | PFAM: Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: mex:Mext_2977 tetratricopeptide TPR_2 repeat protein. (272 aa) |
| | ackA-2 | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. (371 aa) |
| | ACB24682.1 | KEGG: mex:Mext_2299 hypothetical protein. (196 aa) |
| | ACB24806.1 | TIGRFAM: phytoene desaturase; PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: mex:Mext_2726 phytoene desaturase. (511 aa) |
| | ACB24822.1 | PFAM: metallophosphoesterase; KEGG: mex:Mext_2910 metallophosphoesterase. (306 aa) |
| | ACB24827.1 | TIGRFAM: phytoene desaturase; PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: mex:Mext_3011 phytoene desaturase. (507 aa) |
| | ACB24830.1 | KEGG: mag:amb1420 hypothetical protein. (340 aa) |
| | ACB24943.1 | TIGRFAM: ATP--cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase; KEGG: mex:Mext_1541 ATP--cobalamin adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family. (190 aa) |
| | ACB24951.1 | Putative circadian clock protein, KaiC; KEGG: mex:Mext_4110 non-specific serine/threonine protein kinase; PFAM: Circadian clock protein KaiC central region; KaiA binding; SMART: AAA ATPase. (562 aa) |
| | hpf | Sigma 54 modulation protein/ribosomal protein S30EA; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth. (197 aa) |
| | ACB25040.1 | PFAM: Saccharopine dehydrogenase; KEGG: pla:Plav_2027 saccharopine dehydrogenase. (348 aa) |
| | ACB25073.1 | KEGG: mex:Mext_1897 hypothetical protein. (66 aa) |
| | ACB25091.1 | PFAM: peptidase S10 serine carboxypeptidase; KEGG: mex:Mext_4655 peptidase S10 serine carboxypeptidase. (530 aa) |
| | ACB25121.1 | PFAM: protein of unknown function RIO1; protein kinase; SMART: tyrosine protein kinase; protein phosphatase 2C domain protein; serine/threonine protein kinase; KEGG: mex:Mext_1132 protein kinase. (585 aa) |
| | ACB25125.1 | Conserved hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. (107 aa) |
| | recR | Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. (201 aa) |
| | rpmI | PFAM: ribosomal protein L35; KEGG: mex:Mext_1627 ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family. (67 aa) |
| | ACB25272.1 | PFAM: ROSMUCR transcriptional regulator; KEGG: mex:Mext_0170 ROSMUCR transcriptional regulator. (141 aa) |
| | ACB25291.1 | PFAM: Ethanolamine ammonia-lyase light chain; KEGG: mex:Mext_1953 ethanolamine ammonia-lyase; Belongs to the EutC family. (261 aa) |
| | ACB25292.1 | PFAM: Ethanolamine ammonia lyase large subunit; KEGG: jan:Jann_2577 ethanolamine ammonia lyase large subunit. (467 aa) |
| | ACB25333.1 | PFAM: class II aldolase/adducin family protein; KEGG: bja:blr4379 hypothetical protein. (262 aa) |
| | ACB25364.1 | PFAM: ROSMUCR transcriptional regulator; KEGG: mex:Mext_3787 ROSMUCR transcriptional regulator. (135 aa) |
| | edd | 6-phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family. (608 aa) |
| | rpsB | PFAM: ribosomal protein S2; KEGG: mex:Mext_2073 ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. (355 aa) |
| | ACB25428.1 | KEGG: mgr:MGG_06060 hypothetical protein. (128 aa) |
| | nth-2 | Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. (287 aa) |
| | rpmH | PFAM: ribosomal protein L34; KEGG: mex:Mext_2353 ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family. (44 aa) |
| | ACB25499.1 | PFAM: SWIB/MDM2 domain protein; KEGG: mex:Mext_3127 SWIB/MDM2 domain protein. (119 aa) |
| | rpmG | PFAM: ribosomal protein L33; KEGG: mex:Mext_1771 ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family. (55 aa) |
| | rpsP | PFAM: ribosomal protein S16; KEGG: mex:Mext_0653 ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. (120 aa) |
| | ACB25643.1 | PFAM: Formiminotransferase-cyclodeaminase; KEGG: mex:Mext_1798 formiminotransferase-cyclodeaminase. (213 aa) |
| | ACB25669.1 | PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: mex:Mext_3235 methyltransferase type 12. (315 aa) |
| | ACB25674.1 | KEGG: mex:Mext_3230 cobalt chelatase, pCobS small subunit; TIGRFAM: cobalt chelatase, pCobS small subunit; PFAM: ATPase associated with various cellular activities AAA_5. (327 aa) |
| | ACB25675.1 | PFAM: protein of unknown function DUF29; KEGG: rpe:RPE_0134 protein of unknown function DUF29. (164 aa) |
| | rpmB | PFAM: ribosomal protein L28; KEGG: mex:Mext_2978 ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. (100 aa) |
| | ACB25681.1 | PFAM: helicase domain protein; KEGG: mex:Mext_4394 helicase domain protein. (1081 aa) |
| | infB | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. (971 aa) |
| | ACB25784.1 | PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: mex:Mext_2571 DEAD/DEAH box helicase domain protein. (506 aa) |
| | ACB25790.1 | PFAM: protein of unknown function DUF1508; KEGG: mex:Mext_2572 protein of unknown function DUF1508. (61 aa) |
| | rplL | Ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. (125 aa) |
| | rplJ | Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. (172 aa) |
| | ACB25842.1 | PFAM: ROSMUCR transcriptional regulator; KEGG: mex:Mext_3787 ROSMUCR transcriptional regulator. (146 aa) |
| | ACB25849.1 | PFAM: protein of unknown function DUF477; KEGG: mex:Mext_2019 protein of unknown function DUF477. (270 aa) |
| | ACB25856.1 | PFAM: protein of unknown function DUF159; KEGG: acr:Acry_3296 protein of unknown function DUF159; Belongs to the SOS response-associated peptidase family. (222 aa) |
| | ACB25886.1 | PFAM: ROSMUCR transcriptional regulator; KEGG: azc:AZC_1086 putative transcriptional regulator. (137 aa) |
| | ACB25887.1 | PFAM: restriction endonuclease; KEGG: mex:Mext_4774 restriction endonuclease. (249 aa) |
| | cobB-2 | PFAM: Silent information regulator protein Sir2; KEGG: mex:Mext_2216 silent information regulator protein Sir2; Belongs to the sirtuin family. Class III subfamily. (237 aa) |
| | rplY | Ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily. (227 aa) |
| | ihfA | Histone family protein DNA-binding protein; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family. (106 aa) |
| | ACB26044.1 | PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: mex:Mext_3111 tetratricopeptide TPR_2 repeat protein. (622 aa) |
| | ACB26064.1 | TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: mex:Mext_1586 ParB-like partition protein; Belongs to the ParB family. (306 aa) |
| | ACB26088.1 | PFAM: heat shock protein Hsp20; KEGG: pde:Pden_3146 heat shock protein HSP20; Belongs to the small heat shock protein (HSP20) family. (172 aa) |
| | ACB26119.1 | Hypothetical protein; KEGG: xau:Xaut_1087 AAA ATPase. (382 aa) |
| | ACB26209.1 | PFAM: ROSMUCR transcriptional regulator; KEGG: mex:Mext_2834 ROSMUCR transcriptional regulator. (151 aa) |
| | ACB26222.1 | KEGG: mex:Mext_0088 hypothetical protein. (198 aa) |
| | dnaQ | DNA polymerase III, epsilon subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease. (240 aa) |
| | ACB26269.1 | KEGG: mex:Mext_0868 hypothetical protein. (430 aa) |
| | ACB26290.1 | PFAM: ROSMUCR transcriptional regulator; KEGG: mex:Mext_4463 ROSMUCR transcriptional regulator. (179 aa) |
| | ACB26341.1 | PFAM: ROSMUCR transcriptional regulator; KEGG: mex:Mext_2834 ROSMUCR transcriptional regulator. (150 aa) |
| | ACB26380.1 | PFAM: helicase domain protein; KEGG: mex:Mext_0811 helicase domain protein. (714 aa) |
| | ACB26462.1 | KEGG: mex:Mext_3299 hypothetical protein. (282 aa) |
| | ACB26496.1 | KEGG: rpe:RPE_2699 hypothetical protein. (168 aa) |
| | ACB26508.1 | PFAM: aminoglycoside phosphotransferase; protein of unknown function UPF0079; protein of unknown function DUF227; KEGG: mex:Mext_4431 protein of unknown function UPF0079. (529 aa) |
| | ACB26585.1 | PFAM: glycosyl transferase group 1; KEGG: aav:Aave_4407 glycosyl transferase, family 2. (564 aa) |
| | ACB26635.1 | PFAM: ROSMUCR transcriptional regulator; KEGG: mex:Mext_4463 ROSMUCR transcriptional regulator. (169 aa) |
| | ACB26713.1 | PFAM: Integrase catalytic region; KEGG: rpe:RPE_2430 integrase, catalytic region. (754 aa) |
| | ACB26758.1 | Conserved hypothetical protein; Binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); Belongs to the AcsB/BcsB family. (766 aa) |
| | ACB26812.1 | PFAM: ROSMUCR transcriptional regulator; KEGG: mex:Mext_2834 ROSMUCR transcriptional regulator. (146 aa) |
| | ACB26828.1 | PFAM: class II aldolase/adducin family protein; KEGG: pol:Bpro_4082 hypothetical protein. (287 aa) |
| | ACB26840.1 | PFAM: ROSMUCR transcriptional regulator; KEGG: mex:Mext_2834 ROSMUCR transcriptional regulator. (136 aa) |
| | ACB26856.1 | PFAM: ROSMUCR transcriptional regulator; KEGG: mex:Mext_4463 ROSMUCR transcriptional regulator. (180 aa) |
| | ACB26861.1 | KEGG: mex:Mext_4706 hypothetical protein. (55 aa) |
| | ACB26989.1 | TIGRFAM: phytoene desaturase; PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: mex:Mext_3436 phytoene desaturase. (509 aa) |
| | ACB26996.1 | TIGRFAM: phytoene desaturase; PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: mex:Mext_3441 phytoene desaturase. (529 aa) |
| | ACB27006.1 | KEGG: mex:Mext_0429 tetratricopeptide TPR_4 protein. (1127 aa) |
| | rpmF | TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein; KEGG: mex:Mext_3466 ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family. (62 aa) |
| | ACB27123.1 | PFAM: Primase 1; Bifunctional DNA primase/polymerase; KEGG: cth:Cthe_1986 phage / plasmid primase, P4 family. (289 aa) |
| | ACB27124.1 | TIGRFAM: phage/plasmid primase, P4 family; PFAM: primase P4; KEGG: xau:Xaut_3437 phage/plasmid primase, P4 family. (472 aa) |
| | ACB27133.1 | PFAM: ROSMUCR transcriptional regulator; KEGG: mex:Mext_4463 ROSMUCR transcriptional regulator. (190 aa) |
| | ACB27157.1 | PFAM: ParB domain protein nuclease; KEGG: pla:Plav_0315 ParB domain protein nuclease. (595 aa) |
| | ACB27242.1 | KEGG: mgm:Mmc1_2915 hypothetical protein. (1349 aa) |
| | ACB27280.1 | PFAM: helix-hairpin-helix motif; SMART: HhH-GPD family protein; KEGG: mex:Mext_2718 HhH-GPD family protein. (253 aa) |
| | ACB27315.1 | TIGRFAM: ribosomal protein L31; KEGG: mex:Mext_2355 ribosomal protein L31; Belongs to the bacterial ribosomal protein bL31 family. (82 aa) |
| | ACB27364.1 | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. (495 aa) |
| | rplI | Ribosomal protein L9; Binds to the 23S rRNA. (190 aa) |
| | rpsR | Ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. (83 aa) |
| | rpsF | Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. (154 aa) |
| | ACB27373.1 | KEGG: mex:Mext_1944 squalene-hopene cyclase; TIGRFAM: squalene/oxidosqualene cyclase; squalene-hopene cyclase; PFAM: Prenyltransferase/squalene oxidase. (665 aa) |
| | ACB27429.1 | PFAM: lipopolysaccharide biosynthesis protein; KEGG: mca:MCA0149 chain length determinant protein. (510 aa) |
| | rpsU | PFAM: ribosomal protein S21; KEGG: mex:Mext_3777 ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family. (111 aa) |
| | ACB23998.1 | PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: rpa:RPA1907 hypothetical protein. (141 aa) |
| | ACB23990.1 | KEGG: xau:Xaut_3438 virulence-associated protein E. (320 aa) |
| | ACB23989.1 | Hypothetical protein; KEGG: xau:Xaut_1087 AAA ATPase. (404 aa) |
| | ACB23912.1 | PFAM: ROSMUCR transcriptional regulator; KEGG: mex:Mext_2834 ROSMUCR transcriptional regulator. (155 aa) |
| | ACB23855.1 | KEGG: sgl:SG0934 hypothetical protein. (83 aa) |
| | ACB23819.1 | KEGG: dac:Daci_1499 hypothetical protein. (205 aa) |
| | rpsD | RNA-binding S4 domain protein; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. (205 aa) |
| | ACB23714.1 | PFAM: class II aldolase/adducin family protein; KEGG: rpb:RPB_1652 class II aldolase/adducin-like. (267 aa) |
| | ACB23662.1 | PFAM: ROSMUCR transcriptional regulator; KEGG: mex:Mext_3787 ROSMUCR transcriptional regulator. (142 aa) |
| | ACB23514.1 | PFAM: AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: mex:Mext_0275 AAA ATPase central domain protein. (447 aa) |
| | ACB23512.1 | PFAM: ROSMUCR transcriptional regulator; KEGG: mex:Mext_4474 ROSMUCR transcriptional regulator. (160 aa) |
| | ACB23330.1 | Non-specific serine/threonine protein kinase; KEGG: mlo:mlr9679 circadian oscillation regulator KaiC homolog; PFAM: KaiA binding; SMART: AAA ATPase. (502 aa) |
| | ACB23306.1 | KEGG: mex:Mext_3766 hypothetical protein. (232 aa) |
| | ACB23200.1 | KEGG: cbe:Cbei_2590 capsular polysaccharide biosynthesis -like protein. (505 aa) |
| | ACB23196.1 | KEGG: dol:Dole_1287 capsular polysaccharide biosynthesis protein-like protein. (630 aa) |
| | rpsI | PFAM: ribosomal protein S9; KEGG: mex:Mext_2620 ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. (161 aa) |
| | rplM | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. (153 aa) |
| | ACB23137.1 | KEGG: mex:Mext_0006 ATP-dependent DNA helicase RecQ; TIGRFAM: ATP-dependent DNA helicase, RecQ family; ATP-dependent DNA helicase RecQ; PFAM: helicase domain protein; HRDC domain protein; DEAD/DEAH box helicase domain protein; Helicase superfamily 1 and 2 ATP-binding; SMART: DEAD-like helicases. (613 aa) |
| | ACB23134.1 | PFAM: protein of unknown function DUF29; KEGG: rru:Rru_A3208 protein of unknown function DUF29. (164 aa) |
| | ACB23071.1 | PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: mex:Mext_1964 tetratricopeptide TPR_2 repeat protein. (290 aa) |
| | ACB23008.1 | PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: mex:Mext_3984 DEAD/DEAH box helicase domain protein; Belongs to the DEAD box helicase family. (527 aa) |
| | ACB22956.1 | PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mex:Mext_2539 short-chain dehydrogenase/reductase SDR. (255 aa) |
| | rpsO | Ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. (89 aa) |
| | ACB22944.1 | PFAM: Ankyrin; KEGG: xcv:XCV3038 putative phospholipase accessory protein. (223 aa) |
| | ACB22943.1 | KEGG: mex:Mext_4369 hypothetical protein. (137 aa) |
| | ACB22901.1 | PFAM: protein of unknown function DUF125 transmembrane; KEGG: bbt:BBta_7128 putative membrane protein of unknown function. (178 aa) |
| | ACB22854.1 | KEGG: csa:Csal_2956 hypothetical protein. (429 aa) |
| | priA | Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. (729 aa) |
| | ACB22846.1 | PFAM: peptidase S16 lon domain protein; KEGG: mex:Mext_2252 peptidase S16 lon domain protein. (221 aa) |
| | ACB22818.1 | PFAM: Ankyrin; KEGG: mex:Mext_4065 ankyrin. (192 aa) |
| | ACB22806.1 | KEGG: mex:Mext_2156 conserved hypothetical protein. (1145 aa) |
| | ACB22800.1 | Hypothetical protein; KEGG: swi:Swit_0862 phasin family protein. (115 aa) |
| | ACB22768.1 | KEGG: mex:Mext_1974 putative DNA topoisomerase I. (404 aa) |
| | ACB22761.1 | KEGG: mex:Mext_4766 hypothetical protein. (241 aa) |
| | ACB22756.1 | TIGRFAM: protein TolA; PFAM: Tol-Pal system TolA; KEGG: mex:Mext_4761 protein TolA. (450 aa) |
| | ACB22730.1 | PFAM: DNA methylase N-4/N-6 domain protein; KEGG: mex:Mext_3181 DNA methylase N-4/N-6 domain protein; Belongs to the N(4)/N(6)-methyltransferase family. (368 aa) |
| | ACB22657.1 | Hypothetical protein; KEGG: pca:Pcar_1372 putative methyl-accepting chemotaxis protein (MCP). (146 aa) |
| | ACB22596.1 | PFAM: DNA repair protein RadC; KEGG: mex:Mext_2207 DNA repair protein RadC; Belongs to the UPF0758 family. (248 aa) |
| | dnaG | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Belongs to the DnaG primase family. (629 aa) |
| | ACB22504.1 | PFAM: Chromosomal replication initiator DnaA; KEGG: mex:Mext_2066 chromosomal replication initiator DnaA. (236 aa) |
| | ACB22455.1 | PFAM: CHRD domain containing protein; KEGG: nha:Nham_1308 CHRD. (151 aa) |
| | ackA | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. (371 aa) |
| | ACB22300.1 | Conserved hypothetical protein; Binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); Belongs to the AcsB/BcsB family. (862 aa) |
| | rpmJ | TIGRFAM: ribosomal protein L36; KEGG: mex:Mext_2741 ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family. (41 aa) |
| | ACB22157.1 | PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: mex:Mext_2742 tetratricopeptide TPR_2 repeat protein. (203 aa) |
| | ACB22152.1 | PFAM: N-formylglutamate amidohydrolase; KEGG: mex:Mext_2748 N-formylglutamate amidohydrolase. (254 aa) |
| | rplU | Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. (104 aa) |
| | rpmA | PFAM: ribosomal protein L27; KEGG: mex:Mext_4413 ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. (88 aa) |
| | guaB | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. (497 aa) |
| | ACB22102.1 | PFAM: ROSMUCR transcriptional regulator; KEGG: mex:Mext_4474 ROSMUCR transcriptional regulator. (166 aa) |
| | ACB22100.1 | PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mex:Mext_3869 short-chain dehydrogenase/reductase SDR. (234 aa) |
| | ACB22037.1 | PFAM: zinc finger SWIM domain protein; Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; KEGG: mex:Mext_0325 exonuclease RNase T and DNA polymerase III. (289 aa) |
| | ACB22031.1 | KEGG: mex:Mext_3243 hypothetical protein. (171 aa) |
| | dnaA | Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. (498 aa) |
| | recO | DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination. (239 aa) |
| | rplQ | PFAM: ribosomal protein L17; KEGG: mex:Mext_2175 ribosomal protein L17. (136 aa) |
| | rpsK | Ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. (129 aa) |
| | rplO | Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. (167 aa) |
| | rpmD | PFAM: ribosomal protein L30; KEGG: mex:Mext_2183 ribosomal protein L30. (63 aa) |
| | rpsE | Ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family. (195 aa) |
| | rplR | Ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. (120 aa) |
| | rplF | Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. (177 aa) |
| | rpsH | Ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family. (131 aa) |
| | rpsN | Ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family. (101 aa) |
| | rplE | Ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. (188 aa) |
| | rplX | Ribosomal protein L24; One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. (104 aa) |
| | rplN | Ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. (122 aa) |
| | rpsL | Ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy. (123 aa) |
| | rpsG | Ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. (156 aa) |
| | rpsJ | Ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. (102 aa) |
| | rplC | Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. (241 aa) |
| | rplD | Ribosomal protein L4/L1e; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. (206 aa) |
| | rplW | Ribosomal protein L25/L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. (98 aa) |
| | rplB | Ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. (278 aa) |
| | rpsS | Ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. (92 aa) |
| | rplV | Ribosomal protein L22; This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g. L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome (By similarity). (128 aa) |
| | rpsC | Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. (248 aa) |
| | rplP | Ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. (137 aa) |
| | rpmC | PFAM: ribosomal protein L29; KEGG: mex:Mext_2170 ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family. (71 aa) |
| | rpsQ | Ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. (87 aa) |
| | recF | DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family. (384 aa) |
| | ACB24239.1 | KEGG: mex:Mext_1402 hypothetical protein. (238 aa) |
| | ACB24285.1 | KEGG: mex:Mext_1767 hypothetical protein. (233 aa) |
| | ACB24342.1 | DNA repair protein RecN; May be involved in recombinational repair of damaged DNA. (557 aa) |
| | nth | DNA-(apurinic or apyrimidinic site) lyase; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. (239 aa) |
| | ACB24439.1 | Integration host factor, beta subunit; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family. (103 aa) |
| | ACB24441.1 | Ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. (570 aa) |
