(39 nodes) Proteasome complex network (Pyrenophora triticirepentis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PTRG_00424	Ankyrin repeat domain containing protein. (237 aa)
	PTRG_00629	26S protease regulatory subunit 6B; Belongs to the AAA ATPase family. (464 aa)
	PTRG_01765	26S proteasome non-ATPase regulatory subunit 8. (350 aa)
	PTRG_02017	Proteasome subunit beta. (283 aa)
	PTRG_02207	26S proteasome non-ATPase regulatory subunit 11. (423 aa)
	PTRG_01350	Proteasome subunit alpha type. (254 aa)
	PTRG_03290	26S proteasome non-ATPase regulatory subunit 13. (383 aa)
	PTRG_03339	26S protease regulatory subunit 6B; Belongs to the AAA ATPase family. (421 aa)
	PTRG_02643	Uncharacterized protein. (2649 aa)
	PTRG_02716	26S protease regulatory subunit S10B; Belongs to the AAA ATPase family. (393 aa)
	PTRG_02788	Proteasome subunit beta. (182 aa)
	PTRG_02790	Proteasome subunit beta type-1. (264 aa)
	PTRG_02792	Proteasome subunit beta; Belongs to the peptidase T1B family. (260 aa)
	PTRG_02904	Proteasome subunit beta. (224 aa)
	PTRG_04019	26S proteasome regulatory subunit rpn-8. (361 aa)
	PTRG_04026	Proteasome subunit alpha type. (245 aa)
	PTRG_03438	Proteasome subunit alpha type. (256 aa)
	PTRG_04734	26S proteasome non-ATPase regulatory subunit 9. (229 aa)
	PTRG_05323	Ubiquitin carboxyl-terminal hydrolase. (585 aa)
	PTRG_05719	Proteasome subunit alpha type. (279 aa)
	PTRG_06237	Ubiquitin carboxyl-terminal hydrolase 2. (537 aa)
	PTRG_06444	Proteasome subunit beta type-9. (254 aa)
	PTRG_06493	26S proteasome regulatory subunit RPN7. (485 aa)
	PTRG_06533	Proteasome subunit alpha type. (253 aa)
	PTRG_07431	26S proteasome regulatory subunit RPN2; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. (1111 aa)
	PTRG_07012	26S proteasome non-ATPase regulatory subunit 12. (495 aa)
	PTRG_07923	26S proteasome non-ATPase regulatory subunit 4. (299 aa)
	PTRG_08117	26S protease regulatory subunit 7; Belongs to the AAA ATPase family. (438 aa)
	PTRG_08532	26S protease regulatory subunit 6A; Belongs to the AAA ATPase family. (460 aa)
	PTRG_08131	26S protease regulatory subunit 8; Belongs to the AAA ATPase family. (389 aa)
	PTRG_08714	Proteasome subunit beta. (205 aa)
	PTRG_08717	Proteasome subunit alpha type. (290 aa)
	PTRG_08882	Uncharacterized protein. (394 aa)
	PTRG_09187	26S proteasome regulatory subunit RPN1. (134 aa)
	PTRG_09188	26S proteasome regulatory subunit RPN1. (456 aa)
	PTRG_09521	Proteasome subunit alpha type. (273 aa)
	PTRG_10551	Ubiquitin carboxyl-terminal hydrolase. (311 aa)
	PTRG_10619	26S proteasome regulatory subunit RPN11. (290 aa)
	PTRG_11598	26S proteasome non-ATPase regulatory subunit 3. (505 aa)

Your Current Organism:

Pyrenophora triticirepentis

NCBI taxonomy Id: 426418
Other names: P. tritici-repentis Pt-1C-BFP, Pyrenophora tritici-repentis Pt-1C-BFP

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PTRG_00424	PTRG_00629	B2VQT0	B2VS54	Ankyrin repeat domain containing protein.	26S protease regulatory subunit 6B; Belongs to the AAA ATPase family.	0.989
PTRG_00424	PTRG_01765	B2VQT0	B2VSK9	Ankyrin repeat domain containing protein.	26S proteasome non-ATPase regulatory subunit 8.	0.948
PTRG_00424	PTRG_02207	B2VQT0	B2VV24	Ankyrin repeat domain containing protein.	26S proteasome non-ATPase regulatory subunit 11.	0.990
PTRG_00424	PTRG_02716	B2VQT0	B2VZ76	Ankyrin repeat domain containing protein.	26S protease regulatory subunit S10B; Belongs to the AAA ATPase family.	0.990
PTRG_00424	PTRG_02788	B2VQT0	B2VZE8	Ankyrin repeat domain containing protein.	Proteasome subunit beta.	0.488
PTRG_00424	PTRG_03290	B2VQT0	B2VXP4	Ankyrin repeat domain containing protein.	26S proteasome non-ATPase regulatory subunit 13.	0.989
PTRG_00424	PTRG_03339	B2VQT0	B2VXU3	Ankyrin repeat domain containing protein.	26S protease regulatory subunit 6B; Belongs to the AAA ATPase family.	0.990
PTRG_00424	PTRG_03438	B2VQT0	B2W1Z0	Ankyrin repeat domain containing protein.	Proteasome subunit alpha type.	0.441
PTRG_00424	PTRG_04019	B2VQT0	B2W0N4	Ankyrin repeat domain containing protein.	26S proteasome regulatory subunit rpn-8.	0.966
PTRG_00424	PTRG_04734	B2VQT0	B2W534	Ankyrin repeat domain containing protein.	26S proteasome non-ATPase regulatory subunit 9.	0.896
PTRG_00424	PTRG_05323	B2VQT0	B2W685	Ankyrin repeat domain containing protein.	Ubiquitin carboxyl-terminal hydrolase.	0.881
PTRG_00424	PTRG_05719	B2VQT0	B2W7D1	Ankyrin repeat domain containing protein.	Proteasome subunit alpha type.	0.411
PTRG_00424	PTRG_06237	B2VQT0	B2W8C9	Ankyrin repeat domain containing protein.	Ubiquitin carboxyl-terminal hydrolase 2.	0.735
PTRG_00424	PTRG_06493	B2VQT0	B2W935	Ankyrin repeat domain containing protein.	26S proteasome regulatory subunit RPN7.	0.988
PTRG_00424	PTRG_07012	B2VQT0	B2WBJ9	Ankyrin repeat domain containing protein.	26S proteasome non-ATPase regulatory subunit 12.	0.989
PTRG_00424	PTRG_07431	B2VQT0	B2WAW8	Ankyrin repeat domain containing protein.	26S proteasome regulatory subunit RPN2; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	0.990
PTRG_00424	PTRG_07923	B2VQT0	B2WD64	Ankyrin repeat domain containing protein.	26S proteasome non-ATPase regulatory subunit 4.	0.974
PTRG_00424	PTRG_08117	B2VQT0	B2WDQ8	Ankyrin repeat domain containing protein.	26S protease regulatory subunit 7; Belongs to the AAA ATPase family.	0.989
PTRG_00424	PTRG_08131	B2VQT0	B2WEX0	Ankyrin repeat domain containing protein.	26S protease regulatory subunit 8; Belongs to the AAA ATPase family.	0.990
PTRG_00424	PTRG_08532	B2VQT0	B2WEF9	Ankyrin repeat domain containing protein.	26S protease regulatory subunit 6A; Belongs to the AAA ATPase family.	0.990