36 items (Pyrenophora triticirepentis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PTRG_00599	Ubiquitin fusion degradation protein. (357 aa)
	PTRG_02019	Uncharacterized protein. (182 aa)
	PTRG_02103	Phospholipase A-2-activating protein. (770 aa)
	PTRG_01218	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family. (262 aa)
	PTRG_01331	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family. (254 aa)
	PTRG_03247	RING-type domain-containing protein. (397 aa)
	PTRG_04100	Ubiquitin conjugation factor E4. (1095 aa)
	PTRG_04411	Uncharacterized protein. (313 aa)
	PTRG_03535	DNA repair protein RAD23-like protein. (382 aa)
	PTRG_03705	Uncharacterized protein. (582 aa)
	PTRG_04707	Deubiquitination-protection protein dph1. (460 aa)
	PTRG_04731	Proteasome-activating nucleotidase. (568 aa)
	PTRG_04790	Ubiquitin-protein ligase Sel1/Ubx2. (832 aa)
	PTRG_05714	Uncharacterized protein. (887 aa)
	PTRG_05837	Cell division cycle protein 48; Belongs to the AAA ATPase family. (818 aa)
	PTRG_06261	Chitin synthase regulator 3. (814 aa)
	PTRG_06363	RING finger domain containing protein. (777 aa)
	PTRG_06455	OTU domain-containing protein. (328 aa)
	PTRG_07373	UBX domain-containing protein. (473 aa)
	PTRG_07438	TGc domain-containing protein. (442 aa)
	PTRG_06865	Uncharacterized protein. (193 aa)
	PTRG_07064	ATP-dependent Zn protease. (531 aa)
	PTRG_07541	Uncharacterized protein. (185 aa)
	PTRG_07728	PRKCSH domain-containing protein. (530 aa)
	PTRG_07868	Endoplasmic reticulum and nuclear membrane protein Npl4. (655 aa)
	PTRG_08418	AZUL domain-containing protein. (789 aa)
	PTRG_08675	ATPase_AAA_core domain-containing protein. (307 aa)
	PTRG_08285	Cell division cycle protein 48. (743 aa)
	PTRG_08759	UBX domain-containing protein. (549 aa)
	PTRG_08781	UBX domain-containing protein 7. (519 aa)
	PTRG_08846	Ribosome biogenesis ATPase RIX7. (740 aa)
	PTRG_09326	AAA domain-containing protein. (996 aa)
	PTRG_09697	RING finger domain containing protein. (901 aa)
	PTRG_10347	UBX domain containing protein. (517 aa)
	PTRG_10671	AAA domain-containing protein. (727 aa)
	PTRG_11040	Uncharacterized protein. (420 aa)

Your Current Organism:

Pyrenophora triticirepentis

NCBI taxonomy Id: 426418
Other names: P. tritici-repentis Pt-1C-BFP, Pyrenophora tritici-repentis Pt-1C-BFP

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PTRG_00599	PTRG_01218	B2VS24	B2VVK6	Ubiquitin fusion degradation protein.	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	0.957
PTRG_00599	PTRG_01331	B2VS24	B2VVW9	Ubiquitin fusion degradation protein.	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	0.956
PTRG_00599	PTRG_02103	B2VS24	B2VUD0	Ubiquitin fusion degradation protein.	Phospholipase A-2-activating protein.	0.973
PTRG_00599	PTRG_03247	B2VS24	B2VXK1	Ubiquitin fusion degradation protein.	RING-type domain-containing protein.	0.406
PTRG_00599	PTRG_03535	B2VS24	B2W287	Ubiquitin fusion degradation protein.	DNA repair protein RAD23-like protein.	0.775
PTRG_00599	PTRG_03705	B2VS24	B2W2Q7	Ubiquitin fusion degradation protein.	Uncharacterized protein.	0.879
PTRG_00599	PTRG_04100	B2VS24	B2W0W5	Ubiquitin fusion degradation protein.	Ubiquitin conjugation factor E4.	0.957
PTRG_00599	PTRG_04411	B2VS24	B2W1S6	Ubiquitin fusion degradation protein.	Uncharacterized protein.	0.520
PTRG_00599	PTRG_04707	B2VS24	B2W507	Ubiquitin fusion degradation protein.	Deubiquitination-protection protein dph1.	0.691
PTRG_00599	PTRG_04731	B2VS24	B2W531	Ubiquitin fusion degradation protein.	Proteasome-activating nucleotidase.	0.949
PTRG_00599	PTRG_04790	B2VS24	B2W590	Ubiquitin fusion degradation protein.	Ubiquitin-protein ligase Sel1/Ubx2.	0.463
PTRG_00599	PTRG_05837	B2VS24	B2W7P9	Ubiquitin fusion degradation protein.	Cell division cycle protein 48; Belongs to the AAA ATPase family.	0.970
PTRG_00599	PTRG_06363	B2VS24	B2W8Q5	Ubiquitin fusion degradation protein.	RING finger domain containing protein.	0.735
PTRG_00599	PTRG_06455	B2VS24	B2W8Z7	Ubiquitin fusion degradation protein.	OTU domain-containing protein.	0.973
PTRG_00599	PTRG_06865	B2VS24	B2WB53	Ubiquitin fusion degradation protein.	Uncharacterized protein.	0.406
PTRG_00599	PTRG_07064	B2VS24	B2WBQ1	Ubiquitin fusion degradation protein.	ATP-dependent Zn protease.	0.970
PTRG_00599	PTRG_07868	B2VS24	B2WD09	Ubiquitin fusion degradation protein.	Endoplasmic reticulum and nuclear membrane protein Npl4.	0.999
PTRG_00599	PTRG_08285	B2VS24	B2WFC4	Ubiquitin fusion degradation protein.	Cell division cycle protein 48.	0.936
PTRG_00599	PTRG_08675	B2VS24	B2WEV2	Ubiquitin fusion degradation protein.	ATPase_AAA_core domain-containing protein.	0.771
PTRG_00599	PTRG_08759	B2VS24	B2WFQ3	Ubiquitin fusion degradation protein.	UBX domain-containing protein.	0.525