36 items (Pyrenophora triticirepentis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PTRG_00166	Uncharacterized protein. (561 aa)
	PTRG_00179	Microtubule-associated protein RP/EB family member 1. (259 aa)
	PTRG_01692	Calponin. (664 aa)
	PTRG_00767	Chromosome-associated kinesin KIF4; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1712 aa)
	PTRG_01860	Kinesin-II 95 kDa subunit; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (777 aa)
	PTRG_00847	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (447 aa)
	PTRG_02157	Tubulin-specific chaperone A; Belongs to the TBCA family. (113 aa)
	PTRG_01398	Uncharacterized protein. (371 aa)
	PTRG_01528	Spindle pole body component alp14. (881 aa)
	PTRG_01630	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (908 aa)
	PTRG_03174	Uncharacterized protein. (1117 aa)
	PTRG_02619	Uncharacterized protein. (420 aa)
	PTRG_02681	Protein kinase domain-containing protein. (422 aa)
	PTRG_02781	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (817 aa)
	PTRG_04044	Uncharacterized protein. (617 aa)
	PTRG_03479	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (450 aa)
	PTRG_05014	Uncharacterized protein. (196 aa)
	PTRG_05954	Protein regulator of cytokinesis 1. (768 aa)
	PTRG_05957	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (644 aa)
	PTRG_06304	Calponin-homology (CH) domain-containing protein. (1087 aa)
	PTRG_07316	Kinesin heavy chain; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1172 aa)
	PTRG_07034	Uncharacterized protein. (391 aa)
	PTRG_07748	Kinesin heavy chain; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1580 aa)
	PTRG_07815	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (444 aa)
	PTRG_07951	CAP-Gly domain-containing protein. (735 aa)
	PTRG_08450	Uncharacterized protein. (754 aa)
	PTRG_08476	Kinesin; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (661 aa)
	PTRG_08220	Uncharacterized protein. (774 aa)
	PTRG_08264	Uncharacterized protein. (597 aa)
	PTRG_08801	Uncharacterized protein. (255 aa)
	PTRG_09174	Kinetochore protein nuf2. (461 aa)
	PTRG_09593	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (624 aa)
	PTRG_09937	Uncharacterized protein. (488 aa)
	PTRG_10266	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (980 aa)
	PTRG_10815	Anucleate primary sterigmata protein A. (1859 aa)
	PTRG_11609	Uncharacterized protein. (478 aa)

Your Current Organism:

Pyrenophora triticirepentis

NCBI taxonomy Id: 426418
Other names: P. tritici-repentis Pt-1C-BFP, Pyrenophora tritici-repentis Pt-1C-BFP

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PTRG_00179	PTRG_00847	B2VRR7	B2VTD2	Microtubule-associated protein RP/EB family member 1.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.951
PTRG_00179	PTRG_01528	B2VRR7	B2VWG6	Microtubule-associated protein RP/EB family member 1.	Spindle pole body component alp14.	0.954
PTRG_00179	PTRG_01630	B2VRR7	B2VWR8	Microtubule-associated protein RP/EB family member 1.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.507
PTRG_00179	PTRG_01860	B2VRR7	B2VT24	Microtubule-associated protein RP/EB family member 1.	Kinesin-II 95 kDa subunit; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.692
PTRG_00179	PTRG_02781	B2VRR7	B2VZE1	Microtubule-associated protein RP/EB family member 1.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.944
PTRG_00179	PTRG_03479	B2VRR7	B2W231	Microtubule-associated protein RP/EB family member 1.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.918
PTRG_00179	PTRG_04044	B2VRR7	B2W0Q9	Microtubule-associated protein RP/EB family member 1.	Uncharacterized protein.	0.905
PTRG_00179	PTRG_05954	B2VRR7	B2W816	Microtubule-associated protein RP/EB family member 1.	Protein regulator of cytokinesis 1.	0.637
PTRG_00179	PTRG_07034	B2VRR7	B2WBM1	Microtubule-associated protein RP/EB family member 1.	Uncharacterized protein.	0.804
PTRG_00179	PTRG_07316	B2VRR7	B2WAK3	Microtubule-associated protein RP/EB family member 1.	Kinesin heavy chain; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.606
PTRG_00179	PTRG_07815	B2VRR7	B2WCV6	Microtubule-associated protein RP/EB family member 1.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.918
PTRG_00179	PTRG_07951	B2VRR7	B2WD92	Microtubule-associated protein RP/EB family member 1.	CAP-Gly domain-containing protein.	0.954
PTRG_00179	PTRG_08220	B2VRR7	B2WF59	Microtubule-associated protein RP/EB family member 1.	Uncharacterized protein.	0.480
PTRG_00179	PTRG_08476	B2VRR7	B2WEA3	Microtubule-associated protein RP/EB family member 1.	Kinesin; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.692
PTRG_00179	PTRG_09174	B2VRR7	B2WGW8	Microtubule-associated protein RP/EB family member 1.	Kinetochore protein nuf2.	0.443
PTRG_00179	PTRG_09593	B2VRR7	B2WHY4	Microtubule-associated protein RP/EB family member 1.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.893
PTRG_00179	PTRG_10266	B2VRR7	B2WK77	Microtubule-associated protein RP/EB family member 1.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.787
PTRG_00179	PTRG_10815	B2VRR7	B2WLF5	Microtubule-associated protein RP/EB family member 1.	Anucleate primary sterigmata protein A.	0.490
PTRG_00179	PTRG_11609	B2VRR7	B2WNP9	Microtubule-associated protein RP/EB family member 1.	Uncharacterized protein.	0.892
PTRG_00767	PTRG_01630	B2VSY3	B2VWR8	Chromosome-associated kinesin KIF4; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.845