(16 nodes) Chaperonin-mediated protein folding network (Pyrenophora triticirepentis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PTRG_00444	C-myc binding protein. (162 aa)
	PTRG_00849	Uncharacterized protein. (119 aa)
	PTRG_03220	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin. (559 aa)
	PTRG_03306	Uncharacterized protein. (990 aa)
	PTRG_03324	Prefoldin subunit 3; Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins; Belongs to the prefoldin subunit alpha family. (198 aa)
	PTRG_03381	Uncharacterized protein. (126 aa)
	PTRG_02546	T-complex protein 1 subunit gamma. (548 aa)
	PTRG_02777	T-complex protein 1 subunit beta. (528 aa)
	PTRG_05993	Phosducin. (274 aa)
	PTRG_06327	T-complex protein 1 subunit zeta. (540 aa)
	PTRG_06774	T-complex protein 1 subunit epsilon. (542 aa)
	PTRG_07149	Phosducin family protein. (249 aa)
	PTRG_07946	Uncharacterized protein. (119 aa)
	PTRG_08118	T-complex protein 1 subunit delta. (531 aa)
	PTRG_08879	T-complex protein 1 subunit alpha. (570 aa)
	PTRG_10820	T-complex protein 1 subunit theta. (486 aa)

Your Current Organism:

Pyrenophora triticirepentis

NCBI taxonomy Id: 426418
Other names: P. tritici-repentis Pt-1C-BFP, Pyrenophora tritici-repentis Pt-1C-BFP

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PTRG_00444	PTRG_00849	B2VR17	B2VTD4	C-myc binding protein.	Uncharacterized protein.	0.999
PTRG_00444	PTRG_02546	B2VR17	B2VYQ6	C-myc binding protein.	T-complex protein 1 subunit gamma.	0.830
PTRG_00444	PTRG_02777	B2VR17	B2VZD7	C-myc binding protein.	T-complex protein 1 subunit beta.	0.876
PTRG_00444	PTRG_03220	B2VR17	B2VXH4	C-myc binding protein.	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	0.863
PTRG_00444	PTRG_03306	B2VR17	B2VXR0	C-myc binding protein.	Uncharacterized protein.	0.978
PTRG_00444	PTRG_03324	B2VR17	B2VXS8	C-myc binding protein.	Prefoldin subunit 3; Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins; Belongs to the prefoldin subunit alpha family.	0.992
PTRG_00444	PTRG_03381	B2VR17	B2VXZ3	C-myc binding protein.	Uncharacterized protein.	0.999
PTRG_00444	PTRG_06327	B2VR17	B2W8L9	C-myc binding protein.	T-complex protein 1 subunit zeta.	0.856
PTRG_00444	PTRG_06774	B2VR17	B2W9W6	C-myc binding protein.	T-complex protein 1 subunit epsilon.	0.726
PTRG_00444	PTRG_07946	B2VR17	B2WD87	C-myc binding protein.	Uncharacterized protein.	0.998
PTRG_00444	PTRG_08118	B2VR17	B2WDQ9	C-myc binding protein.	T-complex protein 1 subunit delta.	0.957
PTRG_00444	PTRG_08879	B2VR17	B2WG23	C-myc binding protein.	T-complex protein 1 subunit alpha.	0.875
PTRG_00444	PTRG_10820	B2VR17	B2WLG0	C-myc binding protein.	T-complex protein 1 subunit theta.	0.822
PTRG_00849	PTRG_00444	B2VTD4	B2VR17	Uncharacterized protein.	C-myc binding protein.	0.999
PTRG_00849	PTRG_02546	B2VTD4	B2VYQ6	Uncharacterized protein.	T-complex protein 1 subunit gamma.	0.791
PTRG_00849	PTRG_02777	B2VTD4	B2VZD7	Uncharacterized protein.	T-complex protein 1 subunit beta.	0.851
PTRG_00849	PTRG_03220	B2VTD4	B2VXH4	Uncharacterized protein.	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	0.847
PTRG_00849	PTRG_03306	B2VTD4	B2VXR0	Uncharacterized protein.	Uncharacterized protein.	0.974
PTRG_00849	PTRG_03324	B2VTD4	B2VXS8	Uncharacterized protein.	Prefoldin subunit 3; Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins; Belongs to the prefoldin subunit alpha family.	0.982
PTRG_00849	PTRG_03381	B2VTD4	B2VXZ3	Uncharacterized protein.	Uncharacterized protein.	0.999