10 items (Pyrenophora triticirepentis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PTRG_00845	HMG box domain-containing protein. (301 aa)
	PTRG_00506	HMG box protein. (513 aa)
	PTRG_02818	HMG box domain-containing protein. (690 aa)
	PTRG_04765	HMG box domain-containing protein. (480 aa)
	PTRG_08038	Uncharacterized protein. (690 aa)
	PTRG_08584	Non-histone chromosomal protein 6. (106 aa)
	PTRG_10423	HMG box domain-containing protein. (359 aa)
	PTRG_11675	Zn(2)-C6 fungal-type domain-containing protein. (362 aa)
	PTRG_11792	Uncharacterized protein. (88 aa)
	PTRG_12023	HTH CENPB-type domain-containing protein. (388 aa)

Your Current Organism:

Pyrenophora triticirepentis

NCBI taxonomy Id: 426418
Other names: P. tritici-repentis Pt-1C-BFP, Pyrenophora tritici-repentis Pt-1C-BFP

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PTRG_00845	PTRG_08584	B2VTD0	B2WEL1	HMG box domain-containing protein.	Non-histone chromosomal protein 6.	0.410
PTRG_08038	PTRG_11792	B2WDH9	B2WP82	Uncharacterized protein.	Uncharacterized protein.	0.772
PTRG_08038	PTRG_12023	B2WDH9	B2WPW3	Uncharacterized protein.	HTH CENPB-type domain-containing protein.	0.772
PTRG_08584	PTRG_00845	B2WEL1	B2VTD0	Non-histone chromosomal protein 6.	HMG box domain-containing protein.	0.410
PTRG_11675	PTRG_11792	B2WNW5	B2WP82	Zn(2)-C6 fungal-type domain-containing protein.	Uncharacterized protein.	0.772
PTRG_11675	PTRG_12023	B2WNW5	B2WPW3	Zn(2)-C6 fungal-type domain-containing protein.	HTH CENPB-type domain-containing protein.	0.772
PTRG_11792	PTRG_08038	B2WP82	B2WDH9	Uncharacterized protein.	Uncharacterized protein.	0.772
PTRG_11792	PTRG_11675	B2WP82	B2WNW5	Uncharacterized protein.	Zn(2)-C6 fungal-type domain-containing protein.	0.772
PTRG_12023	PTRG_08038	B2WPW3	B2WDH9	HTH CENPB-type domain-containing protein.	Uncharacterized protein.	0.772
PTRG_12023	PTRG_11675	B2WPW3	B2WNW5	HTH CENPB-type domain-containing protein.	Zn(2)-C6 fungal-type domain-containing protein.	0.772