(15 nodes) Translesion synthesis network (Pyrenophora triticirepentis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PTRG_06972	DNA polymerase kappa. (626 aa)
	PTRG_08060	Vezatin domain-containing protein. (614 aa)
	PTRG_09369	DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity. (661 aa)
	PTRG_01904	Uncharacterized protein. (606 aa)
	PTRG_00349	DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family. (878 aa)
	PTRG_00348	REV1_C domain-containing protein. (138 aa)
	PTRG_00567	Uncharacterized protein. (353 aa)
	PTRG_11490	DNA polymerase epsilon subunit B. (775 aa)
	PTRG_00891	HORMA domain-containing protein. (336 aa)
	PTRG_01977	Uncharacterized protein. (277 aa)
	PTRG_02031	Sister chromatid cohesion protein Eso1. (714 aa)
	PTRG_03175	WLM domain containing protein. (443 aa)
	PTRG_05524	SprT-like domain-containing protein. (713 aa)
	PTRG_06013	UmuC domain-containing protein. (123 aa)
	PTRG_07208	DNA polymerase. (1633 aa)

Your Current Organism:

Pyrenophora triticirepentis

NCBI taxonomy Id: 426418
Other names: P. tritici-repentis Pt-1C-BFP, Pyrenophora tritici-repentis Pt-1C-BFP

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PTRG_00348	PTRG_00349	B2VS09	B2VS10	REV1_C domain-containing protein.	DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family.	0.607
PTRG_00348	PTRG_00567	B2VS09	B2VQL6	REV1_C domain-containing protein.	Uncharacterized protein.	0.491
PTRG_00348	PTRG_00891	B2VS09	B2VTP6	REV1_C domain-containing protein.	HORMA domain-containing protein.	0.942
PTRG_00348	PTRG_02031	B2VS09	B2VTY6	REV1_C domain-containing protein.	Sister chromatid cohesion protein Eso1.	0.930
PTRG_00348	PTRG_05524	B2VS09	B2W6T6	REV1_C domain-containing protein.	SprT-like domain-containing protein.	0.491
PTRG_00348	PTRG_06013	B2VS09	B2W875	REV1_C domain-containing protein.	UmuC domain-containing protein.	0.791
PTRG_00348	PTRG_06972	B2VS09	B2WBF9	REV1_C domain-containing protein.	DNA polymerase kappa.	0.900
PTRG_00348	PTRG_07208	B2VS09	B2WA95	REV1_C domain-containing protein.	DNA polymerase.	0.944
PTRG_00348	PTRG_08060	B2VS09	B2WDK1	REV1_C domain-containing protein.	Vezatin domain-containing protein.	0.902
PTRG_00348	PTRG_11490	B2VS09	B2WN41	REV1_C domain-containing protein.	DNA polymerase epsilon subunit B.	0.469
PTRG_00349	PTRG_00348	B2VS10	B2VS09	DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family.	REV1_C domain-containing protein.	0.607
PTRG_00349	PTRG_00567	B2VS10	B2VQL6	DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family.	Uncharacterized protein.	0.491
PTRG_00349	PTRG_00891	B2VS10	B2VTP6	DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family.	HORMA domain-containing protein.	0.942
PTRG_00349	PTRG_02031	B2VS10	B2VTY6	DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family.	Sister chromatid cohesion protein Eso1.	0.930
PTRG_00349	PTRG_05524	B2VS10	B2W6T6	DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family.	SprT-like domain-containing protein.	0.491
PTRG_00349	PTRG_06013	B2VS10	B2W875	DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family.	UmuC domain-containing protein.	0.791
PTRG_00349	PTRG_06972	B2VS10	B2WBF9	DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family.	DNA polymerase kappa.	0.914
PTRG_00349	PTRG_07208	B2VS10	B2WA95	DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family.	DNA polymerase.	0.944
PTRG_00349	PTRG_08060	B2VS10	B2WDK1	DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family.	Vezatin domain-containing protein.	0.902
PTRG_00349	PTRG_11490	B2VS10	B2WN41	DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family.	DNA polymerase epsilon subunit B.	0.469