13 items (Pyrenophora triticirepentis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PTRG_08220	Uncharacterized protein. (774 aa)
	PTRG_07951	CAP-Gly domain-containing protein. (735 aa)
	PTRG_05825	CAP-Gly domain-containing protein. (1173 aa)
	PTRG_05105	HEAT repeat containing protein. (1178 aa)
	PTRG_03660	Tubulin-folding cofactor B. (313 aa)
	PTRG_03573	Spindle pole body component. (926 aa)
	PTRG_04341	Actin-interacting protein (Bud6/Aip3). (998 aa)
	PTRG_02328	Spindle pole body component. (913 aa)
	PTRG_03132	Dynein heavy chain. (4325 aa)
	PTRG_10917	Spindle pole body component. (798 aa)
	PTRG_09833	Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome. (462 aa)
	PTRG_09593	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (624 aa)
	PTRG_09246	Spindle pole body component. (756 aa)

Your Current Organism:

Pyrenophora triticirepentis

NCBI taxonomy Id: 426418
Other names: P. tritici-repentis Pt-1C-BFP, Pyrenophora tritici-repentis Pt-1C-BFP

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PTRG_02328	PTRG_03573	B2VY38	B2W2C5	Spindle pole body component.	Spindle pole body component.	0.998
PTRG_02328	PTRG_09246	B2VY38	B2WFH8	Spindle pole body component.	Spindle pole body component.	0.992
PTRG_02328	PTRG_09833	B2VY38	B2WIM4	Spindle pole body component.	Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.	0.998
PTRG_02328	PTRG_10917	B2VY38	B2WLQ7	Spindle pole body component.	Spindle pole body component.	0.992
PTRG_03132	PTRG_04341	B2VX86	B2W1K6	Dynein heavy chain.	Actin-interacting protein (Bud6/Aip3).	0.420
PTRG_03132	PTRG_05825	B2VX86	B2W7N7	Dynein heavy chain.	CAP-Gly domain-containing protein.	0.983
PTRG_03132	PTRG_07951	B2VX86	B2WD92	Dynein heavy chain.	CAP-Gly domain-containing protein.	0.775
PTRG_03132	PTRG_09593	B2VX86	B2WHY4	Dynein heavy chain.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.879
PTRG_03132	PTRG_09833	B2VX86	B2WIM4	Dynein heavy chain.	Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.	0.805
PTRG_03573	PTRG_02328	B2W2C5	B2VY38	Spindle pole body component.	Spindle pole body component.	0.998
PTRG_03573	PTRG_09246	B2W2C5	B2WFH8	Spindle pole body component.	Spindle pole body component.	0.987
PTRG_03573	PTRG_09593	B2W2C5	B2WHY4	Spindle pole body component.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.489
PTRG_03573	PTRG_09833	B2W2C5	B2WIM4	Spindle pole body component.	Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.	0.998
PTRG_03573	PTRG_10917	B2W2C5	B2WLQ7	Spindle pole body component.	Spindle pole body component.	0.987
PTRG_04341	PTRG_03132	B2W1K6	B2VX86	Actin-interacting protein (Bud6/Aip3).	Dynein heavy chain.	0.420
PTRG_05105	PTRG_07951	B2W3Q5	B2WD92	HEAT repeat containing protein.	CAP-Gly domain-containing protein.	0.445
PTRG_05825	PTRG_03132	B2W7N7	B2VX86	CAP-Gly domain-containing protein.	Dynein heavy chain.	0.983
PTRG_05825	PTRG_07951	B2W7N7	B2WD92	CAP-Gly domain-containing protein.	CAP-Gly domain-containing protein.	0.857
PTRG_07951	PTRG_03132	B2WD92	B2VX86	CAP-Gly domain-containing protein.	Dynein heavy chain.	0.775
PTRG_07951	PTRG_05105	B2WD92	B2W3Q5	CAP-Gly domain-containing protein.	HEAT repeat containing protein.	0.445