(15 nodes) Cellular response to unfolded protein network (Pyrenophora triticirepentis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PTRG_01754	Vacuolar protein sorting-associated protein 74. (351 aa)
	PTRG_01110	Serine/threonine kinase. (308 aa)
	PTRG_02219	Transmembrane BAX inhibitor motif-containing protein 4; Belongs to the BI1 family. (278 aa)
	PTRG_01218	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family. (262 aa)
	PTRG_01502	Sulfate transporter. (422 aa)
	PTRG_00260	LysM domain-containing protein. (188 aa)
	PTRG_02776	Serine/threonine-protein kinase/endoribonuclease IRE1. (1106 aa)
	PTRG_06455	OTU domain-containing protein. (328 aa)
	PTRG_06604	Heat shock 70 kDa protein C; Belongs to the heat shock protein 70 family. (655 aa)
	PTRG_07536	BZIP domain-containing protein. (646 aa)
	PTRG_07541	Uncharacterized protein. (185 aa)
	PTRG_07728	PRKCSH domain-containing protein. (530 aa)
	PTRG_10215	Ubiquitin-like domain-containing protein. (636 aa)
	PTRG_10891	Clock-controlled protein 8. (572 aa)
	PTRG_11256	Heat shock 70 kDa protein, mitochondrial; Belongs to the heat shock protein 70 family. (672 aa)

Your Current Organism:

Pyrenophora triticirepentis

NCBI taxonomy Id: 426418
Other names: P. tritici-repentis Pt-1C-BFP, Pyrenophora tritici-repentis Pt-1C-BFP

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PTRG_01110	PTRG_06604	B2VUX3	B2W9E6	Serine/threonine kinase.	Heat shock 70 kDa protein C; Belongs to the heat shock protein 70 family.	0.966
PTRG_01110	PTRG_07536	B2VUX3	B2WC27	Serine/threonine kinase.	BZIP domain-containing protein.	0.467
PTRG_01218	PTRG_06604	B2VVK6	B2W9E6	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	Heat shock 70 kDa protein C; Belongs to the heat shock protein 70 family.	0.949
PTRG_01218	PTRG_07541	B2VVK6	B2WC32	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	Uncharacterized protein.	0.968
PTRG_01218	PTRG_07728	B2VVK6	B2WCL9	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	PRKCSH domain-containing protein.	0.968
PTRG_02776	PTRG_06604	B2VZD6	B2W9E6	Serine/threonine-protein kinase/endoribonuclease IRE1.	Heat shock 70 kDa protein C; Belongs to the heat shock protein 70 family.	0.989
PTRG_02776	PTRG_07536	B2VZD6	B2WC27	Serine/threonine-protein kinase/endoribonuclease IRE1.	BZIP domain-containing protein.	0.467
PTRG_06604	PTRG_01110	B2W9E6	B2VUX3	Heat shock 70 kDa protein C; Belongs to the heat shock protein 70 family.	Serine/threonine kinase.	0.966
PTRG_06604	PTRG_01218	B2W9E6	B2VVK6	Heat shock 70 kDa protein C; Belongs to the heat shock protein 70 family.	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	0.949
PTRG_06604	PTRG_02776	B2W9E6	B2VZD6	Heat shock 70 kDa protein C; Belongs to the heat shock protein 70 family.	Serine/threonine-protein kinase/endoribonuclease IRE1.	0.989
PTRG_06604	PTRG_07536	B2W9E6	B2WC27	Heat shock 70 kDa protein C; Belongs to the heat shock protein 70 family.	BZIP domain-containing protein.	0.905
PTRG_06604	PTRG_07541	B2W9E6	B2WC32	Heat shock 70 kDa protein C; Belongs to the heat shock protein 70 family.	Uncharacterized protein.	0.686
PTRG_06604	PTRG_07728	B2W9E6	B2WCL9	Heat shock 70 kDa protein C; Belongs to the heat shock protein 70 family.	PRKCSH domain-containing protein.	0.686
PTRG_06604	PTRG_11256	B2W9E6	B2WMP6	Heat shock 70 kDa protein C; Belongs to the heat shock protein 70 family.	Heat shock 70 kDa protein, mitochondrial; Belongs to the heat shock protein 70 family.	0.840
PTRG_07536	PTRG_01110	B2WC27	B2VUX3	BZIP domain-containing protein.	Serine/threonine kinase.	0.467
PTRG_07536	PTRG_02776	B2WC27	B2VZD6	BZIP domain-containing protein.	Serine/threonine-protein kinase/endoribonuclease IRE1.	0.467
PTRG_07536	PTRG_06604	B2WC27	B2W9E6	BZIP domain-containing protein.	Heat shock 70 kDa protein C; Belongs to the heat shock protein 70 family.	0.905
PTRG_07536	PTRG_11256	B2WC27	B2WMP6	BZIP domain-containing protein.	Heat shock 70 kDa protein, mitochondrial; Belongs to the heat shock protein 70 family.	0.438
PTRG_07541	PTRG_01218	B2WC32	B2VVK6	Uncharacterized protein.	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	0.968
PTRG_07541	PTRG_06604	B2WC32	B2W9E6	Uncharacterized protein.	Heat shock 70 kDa protein C; Belongs to the heat shock protein 70 family.	0.686