(12 nodes) Regulation of reproductive process network (Pyrenophora triticirepentis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PTRG_04214	E3 ubiquitin-protein ligase. (817 aa)
	PTRG_06172	Uncharacterized protein. (979 aa)
	PTRG_06352	Cellular morphogenesis regulator DopA. (1850 aa)
	PTRG_07533	Negative regulator of the PHO system. (534 aa)
	PTRG_09416	Cell division control protein 42. (189 aa)
	PTRG_11170	Structural maintenance of chromosomes protein. (1350 aa)
	PTRG_11452	Membrane-associated tyrosine. (1153 aa)
	PTRG_11621	Ras GTPase-activating protein. (769 aa)
	PTRG_11671	Serine/threonine protein kinase Hsk1. (460 aa)
	PTRG_11707	M-phase inducer phosphatase 3. (507 aa)
	PTRG_01064	RRM domain-containing protein. (608 aa)
	PTRG_02906	Uncharacterized protein. (573 aa)

Your Current Organism:

Pyrenophora triticirepentis

NCBI taxonomy Id: 426418
Other names: P. tritici-repentis Pt-1C-BFP, Pyrenophora tritici-repentis Pt-1C-BFP

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PTRG_01064	PTRG_02906	B2VUS7	B2VZR6	RRM domain-containing protein.	Uncharacterized protein.	0.554
PTRG_02906	PTRG_01064	B2VZR6	B2VUS7	Uncharacterized protein.	RRM domain-containing protein.	0.554
PTRG_04214	PTRG_09416	B2W179	B2WHF7	E3 ubiquitin-protein ligase.	Cell division control protein 42.	0.665
PTRG_04214	PTRG_11621	B2W179	B2WNR1	E3 ubiquitin-protein ligase.	Ras GTPase-activating protein.	0.480
PTRG_07533	PTRG_09416	B2WC24	B2WHF7	Negative regulator of the PHO system.	Cell division control protein 42.	0.423
PTRG_09416	PTRG_04214	B2WHF7	B2W179	Cell division control protein 42.	E3 ubiquitin-protein ligase.	0.665
PTRG_09416	PTRG_07533	B2WHF7	B2WC24	Cell division control protein 42.	Negative regulator of the PHO system.	0.423
PTRG_09416	PTRG_11621	B2WHF7	B2WNR1	Cell division control protein 42.	Ras GTPase-activating protein.	0.686
PTRG_09416	PTRG_11707	B2WHF7	B2WNZ7	Cell division control protein 42.	M-phase inducer phosphatase 3.	0.645
PTRG_11452	PTRG_11707	B2WN03	B2WNZ7	Membrane-associated tyrosine.	M-phase inducer phosphatase 3.	0.953
PTRG_11621	PTRG_04214	B2WNR1	B2W179	Ras GTPase-activating protein.	E3 ubiquitin-protein ligase.	0.480
PTRG_11621	PTRG_09416	B2WNR1	B2WHF7	Ras GTPase-activating protein.	Cell division control protein 42.	0.686
PTRG_11707	PTRG_09416	B2WNZ7	B2WHF7	M-phase inducer phosphatase 3.	Cell division control protein 42.	0.645
PTRG_11707	PTRG_11452	B2WNZ7	B2WN03	M-phase inducer phosphatase 3.	Membrane-associated tyrosine.	0.953