(48 nodes) ATPase, AAA-type, core network (Pyrenophora triticirepentis)

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PTRG_00645	Replication factor C subunit 3. (393 aa)
	PTRG_00939	Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication. (787 aa)
	PTRG_02251	Vesicle-fusing ATPase. (824 aa)
	PTRG_01522	Cell division protease ftsH. (784 aa)
	PTRG_03339	26S protease regulatory subunit 6B; Belongs to the AAA ATPase family. (421 aa)
	PTRG_03382	Vacuolar sorting ATPase Vps4; Belongs to the AAA ATPase family. (428 aa)
	PTRG_02481	AAA domain-containing protein. (978 aa)
	PTRG_02716	26S protease regulatory subunit S10B; Belongs to the AAA ATPase family. (393 aa)
	PTRG_02773	Cell division control protein; Belongs to the CDC6/cdc18 family. (642 aa)
	PTRG_11740	ANK_REP_REGION domain-containing protein. (532 aa)
	PTRG_11507	ATPase_AAA_core domain-containing protein; Belongs to the AAA ATPase family. (605 aa)
	PTRG_11456	ATP-dependent chaperone; Belongs to the AAA ATPase family. (575 aa)
	PTRG_10979	Mitochondrial chaperone bcs1. (472 aa)
	PTRG_10671	AAA domain-containing protein. (727 aa)
	PTRG_10503	Heat shock protein 104; Belongs to the ClpA/ClpB family. (920 aa)
	PTRG_09326	AAA domain-containing protein. (996 aa)
	PTRG_08846	Ribosome biogenesis ATPase RIX7. (740 aa)
	PTRG_08772	Peroxisomal biogenesis factor 6. (1020 aa)
	PTRG_09201	Lon protease homolog 2, peroxisomal; ATP-dependent serine protease that mediates the selective degradation of misfolded and unassembled polypeptides in the peroxisomal matrix. Necessary for type 2 peroxisome targeting signal (PTS2)-containing protein processing and facilitates peroxisome matrix protein import; Belongs to the peptidase S16 family. ECO:0000256\|PROSITE-. (923 aa)
	PTRG_08285	Cell division cycle protein 48. (743 aa)
	PTRG_08131	26S protease regulatory subunit 8; Belongs to the AAA ATPase family. (389 aa)
	PTRG_08675	ATPase_AAA_core domain-containing protein. (307 aa)
	PTRG_08532	26S protease regulatory subunit 6A; Belongs to the AAA ATPase family. (460 aa)
	PTRG_08328	26S protease regulatory subunit 8; Belongs to the AAA ATPase family. (485 aa)
	PTRG_08117	26S protease regulatory subunit 7; Belongs to the AAA ATPase family. (438 aa)
	PTRG_07869	Replication factor C subunit 4. (417 aa)
	PTRG_07816	Peroxisomal biogenesis factor 6. (1409 aa)
	PTRG_07064	ATP-dependent Zn protease. (531 aa)
	PTRG_07232	ATPase family AAA domain-containing protein 2. (1619 aa)
	PTRG_06256	AAA domain-containing protein; Belongs to the AAA ATPase family. (662 aa)
	PTRG_06010	Replication factor C subunit 1. (1096 aa)
	PTRG_05882	AAA domain-containing protein. (1248 aa)
	PTRG_05837	Cell division cycle protein 48; Belongs to the AAA ATPase family. (818 aa)
	PTRG_05727	DNA-dependent ATPase MGS1. (534 aa)
	PTRG_05331	ATPase family AAA domain-containing protein 1-A. (1183 aa)
	PTRG_04731	Proteasome-activating nucleotidase. (568 aa)
	PTRG_04724	Stage V sporulation protein K. (1762 aa)
	PIM1	Lon protease homolog, mitochondrial; ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial DNA in a site-specific manner; Belongs to the peptidase S16 family. (1000 aa)
	PTRG_05144	Chromosome transmission fidelity protein 18. (1079 aa)
	PTRG_05140	AAA domain-containing protein. (1049 aa)
	PTRG_03870	Mitochondrial chaperone bcs1; Belongs to the AAA ATPase family. (646 aa)
	PTRG_03638	Replication factor C subunit 4. (353 aa)
	PTRG_03704	ATP-dependent Clp protease ATP-binding subunit clpX. (606 aa)
	PTRG_04065	Mitochondrial chaperone bcs1. (262 aa)
	PTRG_03075	ATPase family AAA domain-containing protein 1-A; Belongs to the AAA ATPase family. (465 aa)
	PTRG_00549	Heat shock protein 78, mitochondrial; Belongs to the ClpA/ClpB family. (790 aa)
	PTRG_00015	Cell division protease ftsH. (877 aa)
	PTRG_00629	26S protease regulatory subunit 6B; Belongs to the AAA ATPase family. (464 aa)

Your Current Organism:

Pyrenophora triticirepentis

NCBI taxonomy Id: 426418
Other names: P. tritici-repentis Pt-1C-BFP, Pyrenophora tritici-repentis Pt-1C-BFP

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PIM1	PTRG_00015	B2W075	B2VRB6	Lon protease homolog, mitochondrial; ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial DNA in a site-specific manner; Belongs to the peptidase S16 family.	Cell division protease ftsH.	0.645
PIM1	PTRG_00549	B2W075	B2VQZ5	Lon protease homolog, mitochondrial; ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial DNA in a site-specific manner; Belongs to the peptidase S16 family.	Heat shock protein 78, mitochondrial; Belongs to the ClpA/ClpB family.	0.601
PIM1	PTRG_01522	B2W075	B2VWG0	Lon protease homolog, mitochondrial; ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial DNA in a site-specific manner; Belongs to the peptidase S16 family.	Cell division protease ftsH.	0.653
PIM1	PTRG_03704	B2W075	B2W2Q6	Lon protease homolog, mitochondrial; ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial DNA in a site-specific manner; Belongs to the peptidase S16 family.	ATP-dependent Clp protease ATP-binding subunit clpX.	0.696
PIM1	PTRG_03870	B2W075	B2W372	Lon protease homolog, mitochondrial; ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial DNA in a site-specific manner; Belongs to the peptidase S16 family.	Mitochondrial chaperone bcs1; Belongs to the AAA ATPase family.	0.450
PIM1	PTRG_04065	B2W075	B2W0T0	Lon protease homolog, mitochondrial; ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial DNA in a site-specific manner; Belongs to the peptidase S16 family.	Mitochondrial chaperone bcs1.	0.450
PIM1	PTRG_08328	B2W075	B2WDV5	Lon protease homolog, mitochondrial; ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial DNA in a site-specific manner; Belongs to the peptidase S16 family.	26S protease regulatory subunit 8; Belongs to the AAA ATPase family.	0.450
PIM1	PTRG_10503	B2W075	B2WKJ3	Lon protease homolog, mitochondrial; ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial DNA in a site-specific manner; Belongs to the peptidase S16 family.	Heat shock protein 104; Belongs to the ClpA/ClpB family.	0.615
PIM1	PTRG_10979	B2W075	B2WLW9	Lon protease homolog, mitochondrial; ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial DNA in a site-specific manner; Belongs to the peptidase S16 family.	Mitochondrial chaperone bcs1.	0.450
PIM1	PTRG_11456	B2W075	B2WN07	Lon protease homolog, mitochondrial; ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial DNA in a site-specific manner; Belongs to the peptidase S16 family.	ATP-dependent chaperone; Belongs to the AAA ATPase family.	0.450
PIM1	PTRG_11507	B2W075	B2WN58	Lon protease homolog, mitochondrial; ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial DNA in a site-specific manner; Belongs to the peptidase S16 family.	ATPase_AAA_core domain-containing protein; Belongs to the AAA ATPase family.	0.450
PIM1	PTRG_11740	B2W075	B2WP30	Lon protease homolog, mitochondrial; ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial DNA in a site-specific manner; Belongs to the peptidase S16 family.	ANK_REP_REGION domain-containing protein.	0.615
PTRG_00015	PIM1	B2VRB6	B2W075	Cell division protease ftsH.	Lon protease homolog, mitochondrial; ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial DNA in a site-specific manner; Belongs to the peptidase S16 family.	0.645
PTRG_00015	PTRG_01522	B2VRB6	B2VWG0	Cell division protease ftsH.	Cell division protease ftsH.	0.500
PTRG_00015	PTRG_03704	B2VRB6	B2W2Q6	Cell division protease ftsH.	ATP-dependent Clp protease ATP-binding subunit clpX.	0.675
PTRG_00015	PTRG_09201	B2VRB6	B2WFD3	Cell division protease ftsH.	Lon protease homolog 2, peroxisomal; ATP-dependent serine protease that mediates the selective degradation of misfolded and unassembled polypeptides in the peroxisomal matrix. Necessary for type 2 peroxisome targeting signal (PTS2)-containing protein processing and facilitates peroxisome matrix protein import; Belongs to the peptidase S16 family. ECO:0000256\|PROSITE-.	0.640
PTRG_00549	PIM1	B2VQZ5	B2W075	Heat shock protein 78, mitochondrial; Belongs to the ClpA/ClpB family.	Lon protease homolog, mitochondrial; ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial DNA in a site-specific manner; Belongs to the peptidase S16 family.	0.601
PTRG_00549	PTRG_03704	B2VQZ5	B2W2Q6	Heat shock protein 78, mitochondrial; Belongs to the ClpA/ClpB family.	ATP-dependent Clp protease ATP-binding subunit clpX.	0.448
PTRG_00549	PTRG_09201	B2VQZ5	B2WFD3	Heat shock protein 78, mitochondrial; Belongs to the ClpA/ClpB family.	Lon protease homolog 2, peroxisomal; ATP-dependent serine protease that mediates the selective degradation of misfolded and unassembled polypeptides in the peroxisomal matrix. Necessary for type 2 peroxisome targeting signal (PTS2)-containing protein processing and facilitates peroxisome matrix protein import; Belongs to the peptidase S16 family. ECO:0000256\|PROSITE-.	0.601
PTRG_00549	PTRG_10503	B2VQZ5	B2WKJ3	Heat shock protein 78, mitochondrial; Belongs to the ClpA/ClpB family.	Heat shock protein 104; Belongs to the ClpA/ClpB family.	0.940