STRINGSTRING
PTRG_01170 PTRG_01170 PTRG_05575 PTRG_05575 PTRG_07610 PTRG_07610 PTRG_08752 PTRG_08752
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PTRG_01170DNA-directed RNA polymerase I and III 14 kDa polypeptide. (126 aa)
PTRG_05575DNA-directed RNA polymerase subunit D. (334 aa)
PTRG_07610DNA-directed RNA polymerases I and III subunit RPAC1. (376 aa)
PTRG_08752RNA polymerase II subunit. (183 aa)
Your Current Organism:
Pyrenophora triticirepentis
NCBI taxonomy Id: 426418
Other names: P. tritici-repentis Pt-1C-BFP, Pyrenophora tritici-repentis Pt-1C-BFP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.