10 items (Pyrenophora triticirepentis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PTRG_02525	Uncharacterized protein. (125 aa)
	PTRG_02068	Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family. (84 aa)
	PTRG_03634	Delta 8-(E)-sphingolipid desaturase. (570 aa)
	PTRG_03522	Rik1-associated factor 1. (1503 aa)
	PTRG_01858	Fatty acid desaturase. (568 aa)
	PTRG_10892	Elongation of fatty acids protein. (349 aa)
	PTRG_10614	Uncharacterized protein. (910 aa)
	PTRG_05824	ATP-binding cassette protein. (710 aa)
	PTRG_04648	ATP-binding cassette protein. (773 aa)
	PTRG_03644	Long-chain-fatty-acid-CoA ligase 1. (705 aa)

Your Current Organism:

Pyrenophora triticirepentis

NCBI taxonomy Id: 426418
Other names: P. tritici-repentis Pt-1C-BFP, Pyrenophora tritici-repentis Pt-1C-BFP

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PTRG_01858	PTRG_02525	B2VT22	B2VYN5	Fatty acid desaturase.	Uncharacterized protein.	0.583
PTRG_01858	PTRG_10892	B2VT22	B2WLN2	Fatty acid desaturase.	Elongation of fatty acids protein.	0.583
PTRG_02525	PTRG_01858	B2VYN5	B2VT22	Uncharacterized protein.	Fatty acid desaturase.	0.583
PTRG_02525	PTRG_03634	B2VYN5	B2W2I6	Uncharacterized protein.	Delta 8-(E)-sphingolipid desaturase.	0.583
PTRG_03522	PTRG_05824	B2W274	B2W7N6	Rik1-associated factor 1.	ATP-binding cassette protein.	0.435
PTRG_03634	PTRG_02525	B2W2I6	B2VYN5	Delta 8-(E)-sphingolipid desaturase.	Uncharacterized protein.	0.583
PTRG_03634	PTRG_10892	B2W2I6	B2WLN2	Delta 8-(E)-sphingolipid desaturase.	Elongation of fatty acids protein.	0.583
PTRG_03644	PTRG_05824	B2W2J6	B2W7N6	Long-chain-fatty-acid-CoA ligase 1.	ATP-binding cassette protein.	0.435
PTRG_04648	PTRG_05824	B2W4U8	B2W7N6	ATP-binding cassette protein.	ATP-binding cassette protein.	0.912
PTRG_05824	PTRG_03522	B2W7N6	B2W274	ATP-binding cassette protein.	Rik1-associated factor 1.	0.435
PTRG_05824	PTRG_03644	B2W7N6	B2W2J6	ATP-binding cassette protein.	Long-chain-fatty-acid-CoA ligase 1.	0.435
PTRG_05824	PTRG_04648	B2W7N6	B2W4U8	ATP-binding cassette protein.	ATP-binding cassette protein.	0.912
PTRG_10892	PTRG_01858	B2WLN2	B2VT22	Elongation of fatty acids protein.	Fatty acid desaturase.	0.583
PTRG_10892	PTRG_03634	B2WLN2	B2W2I6	Elongation of fatty acids protein.	Delta 8-(E)-sphingolipid desaturase.	0.583