59 items (Pyrenophora triticirepentis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PTRG_00545	CS domain-containing protein. (227 aa)
	PTRG_00140	AB hydrolase-1 domain-containing protein. (332 aa)
	PTRG_00071	AB hydrolase-1 domain-containing protein. (468 aa)
	PTRG_01699	MFS domain-containing protein. (526 aa)
	PTRG_00957	Uncharacterized protein. (448 aa)
	PTRG_02161	Uncharacterized protein. (235 aa)
	PTRG_01276	Soluble epoxide hydrolase. (309 aa)
	PTRG_03485	Aldo-keto reductase family 1 member C13. (297 aa)
	PTRG_01328	MFS domain-containing protein. (548 aa)
	PTRG_01484	Lysophospholipase. (575 aa)
	PTRG_01567	MFS domain-containing protein. (546 aa)
	PTRG_01652	Monoxygenase. (306 aa)
	PTRG_03217	AB hydrolase-1 domain-containing protein. (307 aa)
	PTRG_12094	MFS domain-containing protein. (533 aa)
	PTRG_11877	Aldehyde reductase 1. (282 aa)
	PTRG_11636	Nitrogen regulatory protein OTam. (712 aa)
	PTRG_11407	Aldose reductase. (298 aa)
	PTRG_11498	Epoxide hydrolase 2. (387 aa)
	PTRG_11101	Leukotriene A-4 hydrolase hydrolase. (645 aa)
	PTRG_11067	Uncharacterized protein. (215 aa)
	PTRG_10842	Uncharacterized protein. (537 aa)
	PTRG_10841	Acetamidase. (562 aa)
	PTRG_10779	NADP-dependent leukotriene B4 12-hydroxydehydrogenase. (339 aa)
	PTRG_10652	Acetamidase. (557 aa)
	PTRG_03403	MFS domain-containing protein. (725 aa)
	PTRG_02864	Gamma-glutamyltranspeptidase 1. (574 aa)
	PTRG_10644	2,5-diketo-D-gluconic acid reductase A. (288 aa)
	PTRG_10262	Acetamidase. (564 aa)
	PTRG_09899	Uncharacterized protein. (342 aa)
	PTRG_09641	NADPH-dependent D-xylose reductase II,III. (323 aa)
	PTRG_09534	Arabinosidase. (342 aa)
	PTRG_09376	Epoxide hydrolase. (347 aa)
	PTRG_09355	MFS domain-containing protein. (514 aa)
	PTRG_08796	Gliotoxin biosynthesis protein GliK. (338 aa)
	PTRG_08790	Uncharacterized protein. (867 aa)
	PTRG_08779	Dipeptidase; Belongs to the metallo-dependent hydrolases superfamily. Peptidase M19 family. (401 aa)
	PTRG_08761	Diacylglycerol O-acyltransferase 2A. (511 aa)
	PTRG_08190	Aldehyde reductase 1. (329 aa)
	PTRG_07899	NADP-dependent leukotriene B4 12-hydroxydehydrogenase. (347 aa)
	PTRG_07876	Nitrogen regulatory protein OTam. (733 aa)
	PTRG_07496	MFS domain-containing protein. (529 aa)
	PTRG_07482	Epoxide hydrolase 2. (339 aa)
	PTRG_07172	Uncharacterized protein. (485 aa)
	PTRG_06560	Aldehyde reductase 1. (328 aa)
	PTRG_05563	MFS domain-containing protein. (522 aa)
	PTRG_02872	2,5-diketo-D-gluconic acid reductase A. (293 aa)
	PTRG_02947	Linoleate diol synthase (Linoleate (8R)-dioxygenase). (1078 aa)
	PTRG_05386	MFS domain-containing protein. (563 aa)
	PTRG_06202	Linoleate diol synthase (Linoleate (8R)-dioxygenase). (1123 aa)
	PTRG_06101	Aldehyde reductase 1. (338 aa)
	PTRG_04822	NADP-dependent leukotriene B4 12-hydroxydehydrogenase. (354 aa)
	PTRG_04534	Uncharacterized protein. (1084 aa)
	PTRG_04533	Acetamidase. (535 aa)
	PTRG_04498	Uncharacterized protein. (237 aa)
	PTRG_05258	Uncharacterized protein. (291 aa)
	PTRG_03769	Acetamidase. (545 aa)
	PTRG_03975	Uncharacterized protein. (81 aa)
	PTRG_03976	Uncharacterized protein. (347 aa)
	PTRG_04081	Aldose reductase. (296 aa)

Your Current Organism:

Pyrenophora triticirepentis

NCBI taxonomy Id: 426418
Other names: P. tritici-repentis Pt-1C-BFP, Pyrenophora tritici-repentis Pt-1C-BFP

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PTRG_00545	PTRG_02947	B2VR07	B2VZV7	CS domain-containing protein.	Linoleate diol synthase (Linoleate (8R)-dioxygenase).	0.726
PTRG_00545	PTRG_06202	B2VR07	B2W644	CS domain-containing protein.	Linoleate diol synthase (Linoleate (8R)-dioxygenase).	0.726
PTRG_01484	PTRG_02947	B2VWC2	B2VZV7	Lysophospholipase.	Linoleate diol synthase (Linoleate (8R)-dioxygenase).	0.527
PTRG_01484	PTRG_06202	B2VWC2	B2W644	Lysophospholipase.	Linoleate diol synthase (Linoleate (8R)-dioxygenase).	0.527
PTRG_02161	PTRG_02947	B2VUQ7	B2VZV7	Uncharacterized protein.	Linoleate diol synthase (Linoleate (8R)-dioxygenase).	0.433
PTRG_02161	PTRG_06202	B2VUQ7	B2W644	Uncharacterized protein.	Linoleate diol synthase (Linoleate (8R)-dioxygenase).	0.433
PTRG_02864	PTRG_11101	B2VZM4	B2WM91	Gamma-glutamyltranspeptidase 1.	Leukotriene A-4 hydrolase hydrolase.	0.442
PTRG_02947	PTRG_00545	B2VZV7	B2VR07	Linoleate diol synthase (Linoleate (8R)-dioxygenase).	CS domain-containing protein.	0.726
PTRG_02947	PTRG_01484	B2VZV7	B2VWC2	Linoleate diol synthase (Linoleate (8R)-dioxygenase).	Lysophospholipase.	0.527
PTRG_02947	PTRG_02161	B2VZV7	B2VUQ7	Linoleate diol synthase (Linoleate (8R)-dioxygenase).	Uncharacterized protein.	0.433
PTRG_02947	PTRG_09899	B2VZV7	B2WIU0	Linoleate diol synthase (Linoleate (8R)-dioxygenase).	Uncharacterized protein.	0.433
PTRG_03975	PTRG_03976	B2W0J0	B2W0J1	Uncharacterized protein.	Uncharacterized protein.	0.469
PTRG_03976	PTRG_03975	B2W0J1	B2W0J0	Uncharacterized protein.	Uncharacterized protein.	0.469
PTRG_04081	PTRG_11877	B2W0U6	B2WPG7	Aldose reductase.	Aldehyde reductase 1.	0.612
PTRG_06101	PTRG_11407	B2W5U3	B2WNF0	Aldehyde reductase 1.	Aldose reductase.	0.807
PTRG_06202	PTRG_00545	B2W644	B2VR07	Linoleate diol synthase (Linoleate (8R)-dioxygenase).	CS domain-containing protein.	0.726
PTRG_06202	PTRG_01484	B2W644	B2VWC2	Linoleate diol synthase (Linoleate (8R)-dioxygenase).	Lysophospholipase.	0.527
PTRG_06202	PTRG_02161	B2W644	B2VUQ7	Linoleate diol synthase (Linoleate (8R)-dioxygenase).	Uncharacterized protein.	0.433
PTRG_06202	PTRG_09899	B2W644	B2WIU0	Linoleate diol synthase (Linoleate (8R)-dioxygenase).	Uncharacterized protein.	0.433
PTRG_07482	PTRG_08761	B2WB19	B2WFQ5	Epoxide hydrolase 2.	Diacylglycerol O-acyltransferase 2A.	0.845