(46 nodes) Pectin lyase fold network (Fusarium oxysporum f. sp. lycopersici)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0D2Y632	Uncharacterized protein. (276 aa)
	FOXG_17000	Uncharacterized protein; Belongs to the glycosyl hydrolase 28 family. (477 aa)
	FOXG_15415	Galacturan 1,4-alpha-galacturonidase; Belongs to the glycosyl hydrolase 28 family. (464 aa)
	FOXG_14695	Endopolygalacturonase. (371 aa)
	FOXG_13051	Endopolygalacturonase 1. (360 aa)
	FOXG_08862	Exopolygalacturonase. (455 aa)
	FOXG_17656	Beta_helix domain-containing protein. (400 aa)
	A0A0D2XF20	Uncharacterized protein; Belongs to the glycosyl hydrolase 28 family. (467 aa)
	A0A0D2XF24	Amb_all domain-containing protein. (352 aa)
	FOXG_04007	Amb_all domain-containing protein. (336 aa)
	FOXG_13801	Amb_all domain-containing protein. (328 aa)
	FOXG_14004	Polygalacturonase. (323 aa)
	FOXG_14660	Uncharacterized protein; Belongs to the glycosyl hydrolase 28 family. (484 aa)
	FOXG_15355	Uncharacterized protein. (600 aa)
	A0A0D2YGJ3	Pectinesterase domain-containing protein. (387 aa)
	FOXG_12312	Beta_helix domain-containing protein. (391 aa)
	A0A0D2YIP9	Uncharacterized protein. (801 aa)
	FOXG_16516	Amb_all domain-containing protein. (377 aa)
	A0A0D2XLE1	Pectate_lyase_3 domain-containing protein; Belongs to the glycosyl hydrolase 28 family. (492 aa)
	A0A0D2XN78	Uncharacterized protein. (309 aa)
	FOXG_05948	Amb_all domain-containing protein. (328 aa)
	A0A0D2XNX9	Uncharacterized protein. (152 aa)
	FOXG_05617	Amb_all domain-containing protein. (377 aa)
	A0A0D2XQ93	Uncharacterized protein. (64 aa)
	FOXG_06038	Pectate lyase C. (413 aa)
	FOXG_10052	Polygalacturonase. (378 aa)
	FOXG_10062	Pectate_lyase_3 domain-containing protein. (510 aa)
	FOXG_10728	Pectate lyase E. (254 aa)
	FOXG_11096	Amb_all domain-containing protein. (375 aa)
	FOXG_11739	Pectate lyase plyB. (324 aa)
	A0A0D2YB95	Beta_helix domain-containing protein. (300 aa)
	FOXG_13795	Uncharacterized protein. (1161 aa)
	FOXG_13794	Uncharacterized protein. (1397 aa)
	FOXG_13331	CBM1 domain-containing protein. (548 aa)
	FOXG_13249	Pectate lyase. (322 aa)
	A0A0D2YA69	Uncharacterized protein; Belongs to the glycosyl hydrolase 28 family. (438 aa)
	FOXG_13103	Pectate lyase. (233 aa)
	FOXG_12535	Uncharacterized protein. (379 aa)
	FOXG_12264	Pectate lyase. (163 aa)
	A0A0D2Y7L3	Beta_helix domain-containing protein. (412 aa)
	FOXG_12330	Pectinesterase; Involved in maceration and soft-rotting of plant tissue. (329 aa)
	FOXG_17741	Uncharacterized protein. (812 aa)
	A0A0D2XQ94	Uncharacterized protein. (107 aa)
	A0A0D2Y0F6	Uncharacterized protein. (315 aa)
	A0A0D2Y0V3	Uncharacterized protein; Belongs to the glycosyl hydrolase 28 family. (331 aa)
	A0A0D2Y0V4	Pectinesterase; Involved in maceration and soft-rotting of plant tissue. (300 aa)

Your Current Organism:

Fusarium oxysporum f. sp. lycopersici

NCBI taxonomy Id: 426428
Other names: F. oxysporum f. sp. lycopersici 4287, Fusarium oxysporum f. sp. lycopersici 4287

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0D2XN78	A0A0D2Y0F6	A0A0D2XN78	A0A0D2Y0F6	Uncharacterized protein.	Uncharacterized protein.	0.910
A0A0D2XN78	FOXG_04007	A0A0D2XN78	A0A0D2XJ98	Uncharacterized protein.	Amb_all domain-containing protein.	0.918
A0A0D2XN78	FOXG_05948	A0A0D2XN78	A0A0D2XPR0	Uncharacterized protein.	Amb_all domain-containing protein.	0.922
A0A0D2XN78	FOXG_10052	A0A0D2XN78	A0A0D2Y1A9	Uncharacterized protein.	Polygalacturonase.	0.650
A0A0D2XN78	FOXG_10728	A0A0D2XN78	A0A0D2Y377	Uncharacterized protein.	Pectate lyase E.	0.905
A0A0D2XN78	FOXG_11739	A0A0D2XN78	A0A0D2Y631	Uncharacterized protein.	Pectate lyase plyB.	0.920
A0A0D2XN78	FOXG_12264	A0A0D2XN78	A0A0D2Y7J9	Uncharacterized protein.	Pectate lyase.	0.902
A0A0D2XN78	FOXG_12330	A0A0D2XN78	A0A0D2Y7R5	Uncharacterized protein.	Pectinesterase; Involved in maceration and soft-rotting of plant tissue.	0.900
A0A0D2XN78	FOXG_12535	A0A0D2XN78	A0A0D2Y8B9	Uncharacterized protein.	Uncharacterized protein.	0.650
A0A0D2XN78	FOXG_13051	A0A0D2XN78	A0A0C4DHW7	Uncharacterized protein.	Endopolygalacturonase 1.	0.650
A0A0D2XN78	FOXG_13103	A0A0D2XN78	A0A0D2Y9Y2	Uncharacterized protein.	Pectate lyase.	0.905
A0A0D2XN78	FOXG_13249	A0A0D2XN78	A0A0D2YAC4	Uncharacterized protein.	Pectate lyase.	0.923
A0A0D2XN78	FOXG_13801	A0A0D2XN78	A0A0D2YBX1	Uncharacterized protein.	Amb_all domain-containing protein.	0.921
A0A0D2XN78	FOXG_14695	A0A0D2XN78	A0A0C4DHY2	Uncharacterized protein.	Endopolygalacturonase.	0.650
A0A0D2XNX9	FOXG_12264	A0A0D2XNX9	A0A0D2Y7J9	Uncharacterized protein.	Pectate lyase.	0.523
A0A0D2XQ93	A0A0D2YIP9	A0A0D2XQ93	A0A0D2YIP9	Uncharacterized protein.	Uncharacterized protein.	0.901
A0A0D2XQ93	FOXG_17741	A0A0D2XQ93	A0A0D2YKS3	Uncharacterized protein.	Uncharacterized protein.	0.901
A0A0D2Y0F6	A0A0D2XN78	A0A0D2Y0F6	A0A0D2XN78	Uncharacterized protein.	Uncharacterized protein.	0.910
A0A0D2Y0F6	FOXG_04007	A0A0D2Y0F6	A0A0D2XJ98	Uncharacterized protein.	Amb_all domain-containing protein.	0.900
A0A0D2Y0F6	FOXG_05948	A0A0D2Y0F6	A0A0D2XPR0	Uncharacterized protein.	Amb_all domain-containing protein.	0.923