(10 nodes) Termination of RNA polymerase II transcription, and sno(s)RNA catabolic process network (Fusarium nygamai)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	FNYG_14562	Uncharacterized protein. (442 aa)
	FNYG_14419	Uncharacterized protein. (690 aa)
	FNYG_13163	5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II. (988 aa)
	FNYG_12607	RAI1 domain-containing protein. (374 aa)
	FNYG_09417	Uncharacterized protein. (634 aa)
	FNYG_08450	RRM domain-containing protein. (843 aa)
	FNYG_07595	Uncharacterized protein. (687 aa)
	FNYG_07059	Uncharacterized protein. (673 aa)
	FNYG_04252	Uncharacterized protein. (2059 aa)
	FNYG_01896	CID domain-containing protein. (406 aa)

Your Current Organism:

Fusarium nygamai

NCBI taxonomy Id: 42673
Other names: ATCC 58555, BBA 69862, CBS 749.97, DAOM 225148, F. nygamai, Gibberella nygamai, IMI 375354, NRRL 13448

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FNYG_01896	FNYG_04252	A0A2K0WR94	A0A2K0WJU0	CID domain-containing protein.	Uncharacterized protein.	0.447
FNYG_01896	FNYG_07595	A0A2K0WR94	A0A2K0WA50	CID domain-containing protein.	Uncharacterized protein.	0.664
FNYG_01896	FNYG_08450	A0A2K0WR94	A0A2K0W7H1	CID domain-containing protein.	RRM domain-containing protein.	0.443
FNYG_01896	FNYG_12607	A0A2K0WR94	A0A2K0VVN7	CID domain-containing protein.	RAI1 domain-containing protein.	0.971
FNYG_01896	FNYG_13163	A0A2K0WR94	A0A2K0VTU8	CID domain-containing protein.	5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II.	0.971
FNYG_01896	FNYG_14562	A0A2K0WR94	A0A2K0USF7	CID domain-containing protein.	Uncharacterized protein.	0.462
FNYG_04252	FNYG_01896	A0A2K0WJU0	A0A2K0WR94	Uncharacterized protein.	CID domain-containing protein.	0.447
FNYG_04252	FNYG_07595	A0A2K0WJU0	A0A2K0WA50	Uncharacterized protein.	Uncharacterized protein.	0.974
FNYG_04252	FNYG_08450	A0A2K0WJU0	A0A2K0W7H1	Uncharacterized protein.	RRM domain-containing protein.	0.888
FNYG_04252	FNYG_09417	A0A2K0WJU0	A0A2K0W4A9	Uncharacterized protein.	Uncharacterized protein.	0.483
FNYG_04252	FNYG_13163	A0A2K0WJU0	A0A2K0VTU8	Uncharacterized protein.	5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II.	0.658
FNYG_07059	FNYG_07595	A0A2K0WBR9	A0A2K0WA50	Uncharacterized protein.	Uncharacterized protein.	0.944
FNYG_07059	FNYG_13163	A0A2K0WBR9	A0A2K0VTU8	Uncharacterized protein.	5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II.	0.599
FNYG_07595	FNYG_01896	A0A2K0WA50	A0A2K0WR94	Uncharacterized protein.	CID domain-containing protein.	0.664
FNYG_07595	FNYG_04252	A0A2K0WA50	A0A2K0WJU0	Uncharacterized protein.	Uncharacterized protein.	0.974
FNYG_07595	FNYG_07059	A0A2K0WA50	A0A2K0WBR9	Uncharacterized protein.	Uncharacterized protein.	0.944
FNYG_07595	FNYG_08450	A0A2K0WA50	A0A2K0W7H1	Uncharacterized protein.	RRM domain-containing protein.	0.971
FNYG_07595	FNYG_09417	A0A2K0WA50	A0A2K0W4A9	Uncharacterized protein.	Uncharacterized protein.	0.661
FNYG_07595	FNYG_13163	A0A2K0WA50	A0A2K0VTU8	Uncharacterized protein.	5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II.	0.665
FNYG_07595	FNYG_14419	A0A2K0WA50	A0A2K0USQ4	Uncharacterized protein.	Uncharacterized protein.	0.910