(5 nodes) Origin recognition complex network (Fusarium nygamai)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	FNYG_11716	ORC_WH_C domain-containing protein. (717 aa)
	FNYG_10411	PHD-type domain-containing protein. (765 aa)
	FNYG_07549	Uncharacterized protein. (379 aa)
	FNYG_02311	Uncharacterized protein. (577 aa)
	FNYG_00543	AAA_16 domain-containing protein. (472 aa)

Your Current Organism:

Fusarium nygamai

NCBI taxonomy Id: 42673
Other names: ATCC 58555, BBA 69862, CBS 749.97, DAOM 225148, F. nygamai, Gibberella nygamai, IMI 375354, NRRL 13448

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FNYG_00543	FNYG_02311	A0A2K0WVL4	A0A2K0WQY5	AAA_16 domain-containing protein.	Uncharacterized protein.	0.999
FNYG_00543	FNYG_07549	A0A2K0WVL4	A0A2K0WA49	AAA_16 domain-containing protein.	Uncharacterized protein.	0.998
FNYG_00543	FNYG_10411	A0A2K0WVL4	A0A2K0W250	AAA_16 domain-containing protein.	PHD-type domain-containing protein.	0.999
FNYG_00543	FNYG_11716	A0A2K0WVL4	A0A2K0VY25	AAA_16 domain-containing protein.	ORC_WH_C domain-containing protein.	0.998
FNYG_02311	FNYG_00543	A0A2K0WQY5	A0A2K0WVL4	Uncharacterized protein.	AAA_16 domain-containing protein.	0.999
FNYG_02311	FNYG_07549	A0A2K0WQY5	A0A2K0WA49	Uncharacterized protein.	Uncharacterized protein.	0.998
FNYG_02311	FNYG_10411	A0A2K0WQY5	A0A2K0W250	Uncharacterized protein.	PHD-type domain-containing protein.	0.998
FNYG_02311	FNYG_11716	A0A2K0WQY5	A0A2K0VY25	Uncharacterized protein.	ORC_WH_C domain-containing protein.	0.998
FNYG_07549	FNYG_00543	A0A2K0WA49	A0A2K0WVL4	Uncharacterized protein.	AAA_16 domain-containing protein.	0.998
FNYG_07549	FNYG_02311	A0A2K0WA49	A0A2K0WQY5	Uncharacterized protein.	Uncharacterized protein.	0.998
FNYG_07549	FNYG_10411	A0A2K0WA49	A0A2K0W250	Uncharacterized protein.	PHD-type domain-containing protein.	0.996
FNYG_07549	FNYG_11716	A0A2K0WA49	A0A2K0VY25	Uncharacterized protein.	ORC_WH_C domain-containing protein.	0.997
FNYG_10411	FNYG_00543	A0A2K0W250	A0A2K0WVL4	PHD-type domain-containing protein.	AAA_16 domain-containing protein.	0.999
FNYG_10411	FNYG_02311	A0A2K0W250	A0A2K0WQY5	PHD-type domain-containing protein.	Uncharacterized protein.	0.998
FNYG_10411	FNYG_07549	A0A2K0W250	A0A2K0WA49	PHD-type domain-containing protein.	Uncharacterized protein.	0.996
FNYG_10411	FNYG_11716	A0A2K0W250	A0A2K0VY25	PHD-type domain-containing protein.	ORC_WH_C domain-containing protein.	0.999
FNYG_11716	FNYG_00543	A0A2K0VY25	A0A2K0WVL4	ORC_WH_C domain-containing protein.	AAA_16 domain-containing protein.	0.998
FNYG_11716	FNYG_02311	A0A2K0VY25	A0A2K0WQY5	ORC_WH_C domain-containing protein.	Uncharacterized protein.	0.998
FNYG_11716	FNYG_07549	A0A2K0VY25	A0A2K0WA49	ORC_WH_C domain-containing protein.	Uncharacterized protein.	0.997
FNYG_11716	FNYG_10411	A0A2K0VY25	A0A2K0W250	ORC_WH_C domain-containing protein.	PHD-type domain-containing protein.	0.999