(11 nodes) Negative cofactor 2 complex, and Regulation of RNA polymerase II transcription preinitiation complex assembly network (Fusarium nygamai)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	FNYG_15930	Uncharacterized protein. (269 aa)
	FNYG_15931	Uncharacterized protein. (317 aa)
	FNYG_15453	Fungal_trans domain-containing protein. (451 aa)
	FNYG_14666	Uncharacterized protein. (269 aa)
	FNYG_14665	Zn(2)-C6 fungal-type domain-containing protein. (403 aa)
	FNYG_12199	Uncharacterized protein. (292 aa)
	FNYG_04904	CBFD_NFYB_HMF domain-containing protein. (328 aa)
	FNYG_02913	Zn(2)-C6 fungal-type domain-containing protein. (733 aa)
	FNYG_00829	CBFD_NFYB_HMF domain-containing protein. (138 aa)
	FNYG_00335	Uncharacterized protein. (1895 aa)
	FNYG_00081	Uncharacterized protein. (328 aa)

Your Current Organism:

Fusarium nygamai

NCBI taxonomy Id: 42673
Other names: ATCC 58555, BBA 69862, CBS 749.97, DAOM 225148, F. nygamai, Gibberella nygamai, IMI 375354, NRRL 13448

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FNYG_00081	FNYG_00829	A0A2K0WVT1	A0A2K0WU14	Uncharacterized protein.	CBFD_NFYB_HMF domain-containing protein.	0.442
FNYG_00081	FNYG_02913	A0A2K0WVT1	A0A2K0WPM3	Uncharacterized protein.	Zn(2)-C6 fungal-type domain-containing protein.	0.442
FNYG_00081	FNYG_14665	A0A2K0WVT1	A0A2K0US66	Uncharacterized protein.	Zn(2)-C6 fungal-type domain-containing protein.	0.442
FNYG_00081	FNYG_14666	A0A2K0WVT1	A0A2K0US62	Uncharacterized protein.	Uncharacterized protein.	0.442
FNYG_00081	FNYG_15453	A0A2K0WVT1	A0A2K0UD67	Uncharacterized protein.	Fungal_trans domain-containing protein.	0.442
FNYG_00081	FNYG_15930	A0A2K0WVT1	A0A2K0TZP8	Uncharacterized protein.	Uncharacterized protein.	0.442
FNYG_00081	FNYG_15931	A0A2K0WVT1	A0A2K0TZR7	Uncharacterized protein.	Uncharacterized protein.	0.442
FNYG_00335	FNYG_00829	A0A2K0WVN4	A0A2K0WU14	Uncharacterized protein.	CBFD_NFYB_HMF domain-containing protein.	0.924
FNYG_00335	FNYG_02913	A0A2K0WVN4	A0A2K0WPM3	Uncharacterized protein.	Zn(2)-C6 fungal-type domain-containing protein.	0.628
FNYG_00335	FNYG_04904	A0A2K0WVN4	A0A2K0WHX3	Uncharacterized protein.	CBFD_NFYB_HMF domain-containing protein.	0.948
FNYG_00335	FNYG_14665	A0A2K0WVN4	A0A2K0US66	Uncharacterized protein.	Zn(2)-C6 fungal-type domain-containing protein.	0.628
FNYG_00335	FNYG_14666	A0A2K0WVN4	A0A2K0US62	Uncharacterized protein.	Uncharacterized protein.	0.628
FNYG_00335	FNYG_15453	A0A2K0WVN4	A0A2K0UD67	Uncharacterized protein.	Fungal_trans domain-containing protein.	0.628
FNYG_00335	FNYG_15930	A0A2K0WVN4	A0A2K0TZP8	Uncharacterized protein.	Uncharacterized protein.	0.628
FNYG_00335	FNYG_15931	A0A2K0WVN4	A0A2K0TZR7	Uncharacterized protein.	Uncharacterized protein.	0.628
FNYG_00829	FNYG_00081	A0A2K0WU14	A0A2K0WVT1	CBFD_NFYB_HMF domain-containing protein.	Uncharacterized protein.	0.442
FNYG_00829	FNYG_00335	A0A2K0WU14	A0A2K0WVN4	CBFD_NFYB_HMF domain-containing protein.	Uncharacterized protein.	0.924
FNYG_00829	FNYG_04904	A0A2K0WU14	A0A2K0WHX3	CBFD_NFYB_HMF domain-containing protein.	CBFD_NFYB_HMF domain-containing protein.	0.988
FNYG_00829	FNYG_12199	A0A2K0WU14	A0A2K0VWQ8	CBFD_NFYB_HMF domain-containing protein.	Uncharacterized protein.	0.442
FNYG_02913	FNYG_00081	A0A2K0WPM3	A0A2K0WVT1	Zn(2)-C6 fungal-type domain-containing protein.	Uncharacterized protein.	0.442