STRINGSTRING
FNYG_15094 FNYG_15094 FNYG_15001 FNYG_15001 FNYG_14969 FNYG_14969 FNYG_14963 FNYG_14963 FNYG_14793 FNYG_14793 FNYG_14732 FNYG_14732 FNYG_14398 FNYG_14398 FNYG_14352 FNYG_14352 RPB2 RPB2 FNYG_14090 FNYG_14090 FNYG_13766 FNYG_13766 FNYG_13737 FNYG_13737 FNYG_13650 FNYG_13650 FNYG_13487 FNYG_13487 FNYG_13488 FNYG_13488 FNYG_13418 FNYG_13418 FNYG_13411 FNYG_13411 FNYG_13410 FNYG_13410 FNYG_13343 FNYG_13343 FNYG_13124 FNYG_13124 FNYG_13072 FNYG_13072 FNYG_13002 FNYG_13002 FNYG_12622 FNYG_12622 FNYG_12250 FNYG_12250 FNYG_12451 FNYG_12451 FNYG_12050 FNYG_12050 FNYG_11912 FNYG_11912 FNYG_11798 FNYG_11798 FNYG_11724 FNYG_11724 FNYG_11668 FNYG_11668 FNYG_11553 FNYG_11553 FNYG_11574 FNYG_11574 FNYG_11050 FNYG_11050 FNYG_10910 FNYG_10910 FNYG_10757 FNYG_10757 FNYG_10794 FNYG_10794 FNYG_10669 FNYG_10669 FNYG_10407 FNYG_10407 FNYG_10249 FNYG_10249 FNYG_10049 FNYG_10049 FNYG_10124 FNYG_10124 FNYG_09715 FNYG_09715 FNYG_09490 FNYG_09490 FNYG_09524 FNYG_09524 FNYG_09159 FNYG_09159 FNYG_09211 FNYG_09211 FNYG_09261 FNYG_09261 FNYG_09316 FNYG_09316 FNYG_09077 FNYG_09077 FNYG_09119 FNYG_09119 FNYG_09137 FNYG_09137 FNYG_08872 FNYG_08872 FNYG_08720 FNYG_08720 FNYG_08507 FNYG_08507 FNYG_08511 FNYG_08511 FNYG_08396 FNYG_08396 FNYG_08357 FNYG_08357 FNYG_08381 FNYG_08381 FNYG_07703 FNYG_07703 FNYG_07492 FNYG_07492 FNYG_07494 FNYG_07494 FNYG_07569 FNYG_07569 FNYG_07439 FNYG_07439 FNYG_06943 FNYG_06943 FNYG_06955 FNYG_06955 FNYG_07051 FNYG_07051 FNYG_06887 FNYG_06887 FNYG_06458 FNYG_06458 FNYG_05820 FNYG_05820 FNYG_05536 FNYG_05536 FNYG_05537 FNYG_05537 FNYG_05134 FNYG_05134 FNYG_04670 FNYG_04670 FNYG_04759 FNYG_04759 FNYG_04589 FNYG_04589 FNYG_04460 FNYG_04460 FNYG_04151 FNYG_04151 FNYG_04198 FNYG_04198 FNYG_04282 FNYG_04282 FNYG_03407 FNYG_03407 FNYG_03595 FNYG_03595 FNYG_03648 FNYG_03648 RPB1 RPB1 FNYG_03000 FNYG_03000 FNYG_03226 FNYG_03226 FNYG_02173 FNYG_02173 FNYG_01801 FNYG_01801 FNYG_01865 FNYG_01865 FNYG_01876 FNYG_01876 FNYG_01913 FNYG_01913 FNYG_01955 FNYG_01955 FNYG_01720 FNYG_01720 FNYG_01663 FNYG_01663 FNYG_01389 FNYG_01389 FNYG_01274 FNYG_01274 FNYG_00767 FNYG_00767 FNYG_00966 FNYG_00966 FNYG_01096 FNYG_01096 FNYG_01160 FNYG_01160 FNYG_00050 FNYG_00050 FNYG_00065 FNYG_00065
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
FNYG_15094BTB domain-containing protein. (289 aa)
FNYG_15001Protein kinase domain-containing protein. (268 aa)
FNYG_14969Protein kinase domain-containing protein. (535 aa)
FNYG_14963Uncharacterized protein. (804 aa)
FNYG_14793Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (413 aa)
FNYG_14732Uncharacterized protein. (851 aa)
FNYG_14398Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family. (119 aa)
FNYG_14352Uncharacterized protein. (591 aa)
RPB2DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1270 aa)
FNYG_14090BTB domain-containing protein. (207 aa)
FNYG_13766Uncharacterized protein. (548 aa)
FNYG_13737TAF domain-containing protein. (463 aa)
FNYG_13650Uncharacterized protein. (290 aa)
FNYG_13487HMG box domain-containing protein. (354 aa)
FNYG_13488Uncharacterized protein. (922 aa)
FNYG_13418RPOL4c domain-containing protein. (158 aa)
FNYG_13411Uncharacterized protein. (382 aa)
FNYG_13410Uncharacterized protein. (373 aa)
FNYG_13343General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. (468 aa)
FNYG_13124Uncharacterized protein. (539 aa)
FNYG_13072PHD domain-containing protein. (718 aa)
FNYG_13002Uncharacterized protein. (470 aa)
FNYG_12622Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. (1047 aa)
FNYG_12250Uncharacterized protein. (383 aa)
FNYG_12451Uncharacterized protein. (510 aa)
FNYG_12050RNA_pol_L_2 domain-containing protein. (143 aa)
FNYG_11912Uncharacterized protein. (72 aa)
FNYG_11798Uncharacterized protein. (306 aa)
FNYG_11724Uncharacterized protein. (172 aa)
FNYG_11668Uncharacterized protein. (277 aa)
FNYG_11553FACT complex subunit POB3; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of [...] (564 aa)
FNYG_11574Uncharacterized protein. (1160 aa)
FNYG_11050Uncharacterized protein. (380 aa)
FNYG_10910TFIID_20kDa domain-containing protein. (687 aa)
FNYG_10757Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (115 aa)
FNYG_10794BTB domain-containing protein. (409 aa)
FNYG_10669Serine protease; Belongs to the peptidase S1B family. (591 aa)
FNYG_10407CDC73_C domain-containing protein. (409 aa)
FNYG_10249Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. (123 aa)
FNYG_10049Uncharacterized protein. (763 aa)
FNYG_10124Tyrosinase_Cu-bd domain-containing protein. (351 aa)
FNYG_09715Protein kinase domain-containing protein. (994 aa)
FNYG_09490Uncharacterized protein. (71 aa)
FNYG_09524Uncharacterized protein. (1032 aa)
FNYG_09159Uncharacterized protein. (211 aa)
FNYG_09211Uncharacterized protein. (406 aa)
FNYG_09261CYCLIN domain-containing protein; Belongs to the cyclin family. (443 aa)
FNYG_09316Uncharacterized protein. (416 aa)
FNYG_09077TAFII55_N domain-containing protein. (493 aa)
FNYG_09119Uncharacterized protein. (697 aa)
FNYG_09137TFIIB-type domain-containing protein. (346 aa)
FNYG_08872Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...] (188 aa)
FNYG_08720TAFII28 domain-containing protein. (320 aa)
FNYG_08507RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. (769 aa)
FNYG_08511Helicase ATP-binding domain-containing protein. (864 aa)
FNYG_08396Uncharacterized protein. (475 aa)
FNYG_08357CID domain-containing protein. (258 aa)
FNYG_08381Uncharacterized protein. (825 aa)
FNYG_07703TFIIS N-terminal domain-containing protein. (428 aa)
FNYG_07492FCP1 homology domain-containing protein. (496 aa)
FNYG_07494Uncharacterized protein. (346 aa)
FNYG_07569RPOLD domain-containing protein. (340 aa)
FNYG_07439Uncharacterized protein. (493 aa)
FNYG_06943Transcription elongation factor Spt6; Plays a role in maintenance of chromatin structure during RNA polymerase II transcription elongation thereby repressing transcription initiation from cryptic promoters. Mediates the reassembly of nucleosomes onto the promoters of at least a selected set of genes during repression; the nucleosome reassembly is essential for transcriptional repression; Belongs to the SPT6 family. (1406 aa)
FNYG_06955Plus3 domain-containing protein. (596 aa)
FNYG_07051WD_REPEATS_REGION domain-containing protein. (480 aa)
FNYG_06887Uncharacterized protein. (307 aa)
FNYG_06458Uncharacterized protein. (1214 aa)
FNYG_05820Uncharacterized protein. (254 aa)
FNYG_05536Uncharacterized protein. (83 aa)
FNYG_05537Uncharacterized protein. (205 aa)
FNYG_05134Uncharacterized protein. (356 aa)
FNYG_04670Cyclin N-terminal domain-containing protein. (413 aa)
FNYG_04759RTR1-type domain-containing protein. (267 aa)
FNYG_04589RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (496 aa)
FNYG_04460RPOL9 domain-containing protein. (186 aa)
FNYG_04151Uncharacterized protein. (2415 aa)
FNYG_04198Uncharacterized protein. (537 aa)
FNYG_04282Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (304 aa)
FNYG_03407HMG box domain-containing protein. (549 aa)
FNYG_03595Uncharacterized protein. (253 aa)
FNYG_03648Uncharacterized protein. (308 aa)
RPB1DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1744 aa)
FNYG_03000Uncharacterized protein. (312 aa)
FNYG_03226Uncharacterized protein. (665 aa)
FNYG_02173Uncharacterized protein. (163 aa)
FNYG_01801Uncharacterized protein. (758 aa)
FNYG_01865Uncharacterized protein. (441 aa)
FNYG_01876Nitroreductase domain-containing protein. (205 aa)
FNYG_01913HTH TFE/IIEalpha-type domain-containing protein. (385 aa)
FNYG_01955Uncharacterized protein. (578 aa)
FNYG_01720Uncharacterized protein. (203 aa)
FNYG_01663Uncharacterized protein. (259 aa)
FNYG_01389Cyclin_C_2 domain-containing protein. (348 aa)
FNYG_01274F-box domain-containing protein. (526 aa)
FNYG_00767Uncharacterized protein. (1499 aa)
FNYG_00966DUF3591 domain-containing protein. (1300 aa)
FNYG_01096RING-type domain-containing protein. (363 aa)
FNYG_01160Uncharacterized protein. (269 aa)
FNYG_00050Helicase ATP-binding domain-containing protein. (748 aa)
FNYG_00065BSD domain-containing protein. (645 aa)
Your Current Organism:
Fusarium nygamai
NCBI taxonomy Id: 42673
Other names: ATCC 58555, BBA 69862, CBS 749.97, DAOM 225148, F. nygamai, Gibberella nygamai, IMI 375354, NRRL 13448
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