16 items (Fusarium nygamai) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	FNYG_14793	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (413 aa)
	FNYG_13410	Uncharacterized protein. (373 aa)
	FNYG_13343	General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. (468 aa)
	FNYG_13002	Uncharacterized protein. (470 aa)
	FNYG_10757	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (115 aa)
	FNYG_09137	TFIIB-type domain-containing protein. (346 aa)
	FNYG_08381	Uncharacterized protein. (825 aa)
	FNYG_05820	Uncharacterized protein. (254 aa)
	FNYG_05134	Uncharacterized protein. (356 aa)
	FNYG_04282	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (304 aa)
	FNYG_03226	Uncharacterized protein. (665 aa)
	FNYG_01913	HTH TFE/IIEalpha-type domain-containing protein. (385 aa)
	FNYG_01389	Cyclin_C_2 domain-containing protein. (348 aa)
	FNYG_01096	RING-type domain-containing protein. (363 aa)
	FNYG_00050	Helicase ATP-binding domain-containing protein. (748 aa)
	FNYG_00065	BSD domain-containing protein. (645 aa)

Your Current Organism:

Fusarium nygamai

NCBI taxonomy Id: 42673
Other names: ATCC 58555, BBA 69862, CBS 749.97, DAOM 225148, F. nygamai, Gibberella nygamai, IMI 375354, NRRL 13448

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FNYG_00050	FNYG_00065	A0A2K0WWD5	A0A2K0WWF4	Helicase ATP-binding domain-containing protein.	BSD domain-containing protein.	0.997
FNYG_00050	FNYG_01096	A0A2K0WWD5	A0A2K0WUU1	Helicase ATP-binding domain-containing protein.	RING-type domain-containing protein.	0.997
FNYG_00050	FNYG_01389	A0A2K0WWD5	A0A2K0WSD1	Helicase ATP-binding domain-containing protein.	Cyclin_C_2 domain-containing protein.	0.992
FNYG_00050	FNYG_01913	A0A2K0WWD5	A0A2K0WRB8	Helicase ATP-binding domain-containing protein.	HTH TFE/IIEalpha-type domain-containing protein.	0.994
FNYG_00050	FNYG_03226	A0A2K0WWD5	A0A2K0WN15	Helicase ATP-binding domain-containing protein.	Uncharacterized protein.	0.979
FNYG_00050	FNYG_04282	A0A2K0WWD5	A0A2K0WJW5	Helicase ATP-binding domain-containing protein.	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.	0.994
FNYG_00050	FNYG_05134	A0A2K0WWD5	A0A2K0WH82	Helicase ATP-binding domain-containing protein.	Uncharacterized protein.	0.997
FNYG_00050	FNYG_05820	A0A2K0WWD5	A0A2K0WEZ8	Helicase ATP-binding domain-containing protein.	Uncharacterized protein.	0.976
FNYG_00050	FNYG_08381	A0A2K0WWD5	A0A2K0W833	Helicase ATP-binding domain-containing protein.	Uncharacterized protein.	0.979
FNYG_00050	FNYG_09137	A0A2K0WWD5	A0A2K0W5V4	Helicase ATP-binding domain-containing protein.	TFIIB-type domain-containing protein.	0.985
FNYG_00050	FNYG_10757	A0A2K0WWD5	A0A2K0W0T7	Helicase ATP-binding domain-containing protein.	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family.	0.962
FNYG_00050	FNYG_13002	A0A2K0WWD5	A0A2K0VUF1	Helicase ATP-binding domain-containing protein.	Uncharacterized protein.	0.971
FNYG_00050	FNYG_13343	A0A2K0WWD5	A0A2K0VTH6	Helicase ATP-binding domain-containing protein.	General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family.	0.997
FNYG_00050	FNYG_13410	A0A2K0WWD5	A0A2K0VTD3	Helicase ATP-binding domain-containing protein.	Uncharacterized protein.	0.977
FNYG_00050	FNYG_14793	A0A2K0WWD5	A0A2K0UQ40	Helicase ATP-binding domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.990
FNYG_00065	FNYG_00050	A0A2K0WWF4	A0A2K0WWD5	BSD domain-containing protein.	Helicase ATP-binding domain-containing protein.	0.997
FNYG_00065	FNYG_01096	A0A2K0WWF4	A0A2K0WUU1	BSD domain-containing protein.	RING-type domain-containing protein.	0.995
FNYG_00065	FNYG_01389	A0A2K0WWF4	A0A2K0WSD1	BSD domain-containing protein.	Cyclin_C_2 domain-containing protein.	0.990
FNYG_00065	FNYG_01913	A0A2K0WWF4	A0A2K0WRB8	BSD domain-containing protein.	HTH TFE/IIEalpha-type domain-containing protein.	0.996
FNYG_00065	FNYG_03226	A0A2K0WWF4	A0A2K0WN15	BSD domain-containing protein.	Uncharacterized protein.	0.984