26 items (Fusarium nygamai) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	FNYG_12547	Protein kinase domain-containing protein. (409 aa)
	FNYG_08211	Uncharacterized protein. (619 aa)
	FNYG_08206	Flavin_Reduct domain-containing protein. (287 aa)
	FNYG_08614	Uncharacterized protein. (332 aa)
	FNYG_14597	Uncharacterized protein. (101 aa)
	FNYG_00260	Uncharacterized protein. (1358 aa)
	FNYG_13324	Uncharacterized protein. (280 aa)
	FNYG_00468	Uncharacterized protein. (318 aa)
	FNYG_00982	Flavin_Reduct domain-containing protein. (296 aa)
	FNYG_01576	Uncharacterized protein. (153 aa)
	FNYG_03519	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (394 aa)
	FNYG_04214	Protein kinase domain-containing protein. (654 aa)
	FNYG_04173	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (371 aa)
	FNYG_04988	Protein kinase domain-containing protein. (909 aa)
	FNYG_08210	Protein kinase domain-containing protein. (704 aa)
	FNYG_07723	Protein kinase domain-containing protein. (299 aa)
	FNYG_07556	Uncharacterized protein. (221 aa)
	FNYG_07119	Protein kinase domain-containing protein. (256 aa)
	FNYG_06067	Protein kinase domain-containing protein. (1088 aa)
	FNYG_06310	Protein kinase domain-containing protein. (1148 aa)
	FNYG_05496	Uncharacterized protein. (1019 aa)
	FNYG_05687	HET domain-containing protein. (618 aa)
	FNYG_09844	Uncharacterized protein. (313 aa)
	FNYG_10367	Protein kinase domain-containing protein. (974 aa)
	FNYG_11425	Protein kinase domain-containing protein. (345 aa)
	FNYG_12232	HET domain-containing protein. (276 aa)

Your Current Organism:

Fusarium nygamai

NCBI taxonomy Id: 42673
Other names: ATCC 58555, BBA 69862, CBS 749.97, DAOM 225148, F. nygamai, Gibberella nygamai, IMI 375354, NRRL 13448

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FNYG_00260	FNYG_00468	A0A2K0WWA4	A0A2K0WVE1	Uncharacterized protein.	Uncharacterized protein.	0.693
FNYG_00260	FNYG_04214	A0A2K0WWA4	A0A2K0WJT4	Uncharacterized protein.	Protein kinase domain-containing protein.	0.439
FNYG_00260	FNYG_05496	A0A2K0WWA4	A0A2K0WFH0	Uncharacterized protein.	Uncharacterized protein.	0.693
FNYG_00260	FNYG_05687	A0A2K0WWA4	A0A2K0WG24	Uncharacterized protein.	HET domain-containing protein.	0.439
FNYG_00260	FNYG_07556	A0A2K0WWA4	A0A2K0W9Z1	Uncharacterized protein.	Uncharacterized protein.	0.439
FNYG_00260	FNYG_08614	A0A2K0WWA4	A0A2K0W6I7	Uncharacterized protein.	Uncharacterized protein.	0.693
FNYG_00260	FNYG_12232	A0A2K0WWA4	A0A2K0VVZ8	Uncharacterized protein.	HET domain-containing protein.	0.439
FNYG_00260	FNYG_13324	A0A2K0WWA4	A0A2K0VTH5	Uncharacterized protein.	Uncharacterized protein.	0.693
FNYG_00260	FNYG_14597	A0A2K0WWA4	A0A2K0USF0	Uncharacterized protein.	Uncharacterized protein.	0.439
FNYG_00468	FNYG_00260	A0A2K0WVE1	A0A2K0WWA4	Uncharacterized protein.	Uncharacterized protein.	0.693
FNYG_00468	FNYG_03519	A0A2K0WVE1	A0A2K0WLP5	Uncharacterized protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.634
FNYG_00468	FNYG_04214	A0A2K0WVE1	A0A2K0WJT4	Uncharacterized protein.	Protein kinase domain-containing protein.	0.617
FNYG_00468	FNYG_05496	A0A2K0WVE1	A0A2K0WFH0	Uncharacterized protein.	Uncharacterized protein.	0.684
FNYG_00468	FNYG_05687	A0A2K0WVE1	A0A2K0WG24	Uncharacterized protein.	HET domain-containing protein.	0.617
FNYG_00468	FNYG_06310	A0A2K0WVE1	A0A2K0WEL3	Uncharacterized protein.	Protein kinase domain-containing protein.	0.400
FNYG_00468	FNYG_07556	A0A2K0WVE1	A0A2K0W9Z1	Uncharacterized protein.	Uncharacterized protein.	0.617
FNYG_00468	FNYG_12232	A0A2K0WVE1	A0A2K0VVZ8	Uncharacterized protein.	HET domain-containing protein.	0.617
FNYG_00468	FNYG_14597	A0A2K0WVE1	A0A2K0USF0	Uncharacterized protein.	Uncharacterized protein.	0.617
FNYG_03519	FNYG_00468	A0A2K0WLP5	A0A2K0WVE1	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.634
FNYG_03519	FNYG_04173	A0A2K0WLP5	A0A2K0WJL5	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.923