57 items (Fusarium nygamai) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	FNYG_03410	Uncharacterized protein. (1115 aa)
	FNYG_03462	Rap-GAP domain-containing protein. (1632 aa)
	FNYG_03544	Rab-GAP TBC domain-containing protein. (979 aa)
	FNYG_03015	Uncharacterized protein. (82 aa)
	FNYG_03058	RanBD1 domain-containing protein. (242 aa)
	FNYG_03057	Uncharacterized protein. (674 aa)
	FNYG_02156	Uncharacterized protein. (1006 aa)
	FNYG_02203	Rab-GAP TBC domain-containing protein. (825 aa)
	FNYG_00621	Uncharacterized protein. (929 aa)
	FNYG_00476	Uncharacterized protein. (382 aa)
	FNYG_00813	GH16 domain-containing protein. (245 aa)
	FNYG_00666	Uncharacterized protein. (399 aa)
	FNYG_00673	Arf-GAP domain-containing protein. (558 aa)
	FNYG_00615	Arf-GAP domain-containing protein. (371 aa)
	FNYG_15260	Rab-GAP TBC domain-containing protein. (379 aa)
	FNYG_14803	Uncharacterized protein. (837 aa)
	FNYG_14014	Rab-GAP TBC domain-containing protein. (708 aa)
	FNYG_13359	Rab-GAP TBC domain-containing protein. (482 aa)
	FNYG_13363	Uncharacterized protein. (1500 aa)
	FNYG_13352	Rab-GAP TBC domain-containing protein. (1084 aa)
	FNYG_13162	Ras-GAP domain-containing protein. (2448 aa)
	FNYG_13220	UDENN FLCN/SMCR8-type domain-containing protein. (470 aa)
	FNYG_13018	Uncharacterized protein. (499 aa)
	FNYG_12676	C-CAP/cofactor C-like domain-containing protein. (363 aa)
	FNYG_12374	Pectate_lyase_3 domain-containing protein. (510 aa)
	FNYG_12164	Uncharacterized protein. (479 aa)
	FNYG_11916	Rab-GAP TBC domain-containing protein. (995 aa)
	FNYG_11705	Uncharacterized protein. (1157 aa)
	FNYG_11351	Uncharacterized protein. (658 aa)
	FNYG_10954	CCHC-type domain-containing protein. (718 aa)
	FNYG_11002	C2 domain-containing protein. (608 aa)
	FNYG_11023	Arf-GAP domain-containing protein. (501 aa)
	FNYG_11067	TFCD_C domain-containing protein. (1220 aa)
	FNYG_11082	DEP domain-containing protein. (1837 aa)
	FNYG_11111	Rab-GAP TBC domain-containing protein. (1044 aa)
	FNYG_10376	Uncharacterized protein. (1162 aa)
	FNYG_10408	Uncharacterized protein. (720 aa)
	FNYG_09494	Uncharacterized protein. (733 aa)
	FNYG_09167	Uncharacterized protein. (418 aa)
	FNYG_09396	WD_REPEATS_REGION domain-containing protein. (986 aa)
	FNYG_09385	Ras-GAP domain-containing protein. (776 aa)
	FNYG_08854	Rab-GAP TBC domain-containing protein. (1051 aa)
	FNYG_08226	Uncharacterized protein. (595 aa)
	FNYG_08275	Uncharacterized protein. (1108 aa)
	FNYG_08281	Uncharacterized protein. (365 aa)
	FNYG_08379	VPS9 domain-containing protein. (708 aa)
	FNYG_07519	Uncharacterized protein. (1764 aa)
	FNYG_06218	Ras-GAP domain-containing protein. (1237 aa)
	FNYG_05901	Rab-GAP TBC domain-containing protein. (599 aa)
	FNYG_04859	Rho-GAP domain-containing protein. (965 aa)
	FNYG_04980	W2 domain-containing protein. (423 aa)
	FNYG_04455	Uncharacterized protein. (281 aa)
	FNYG_04528	Uncharacterized protein. (798 aa)
	FNYG_04176	Rab-GAP TBC domain-containing protein. (1124 aa)
	FNYG_04264	Uncharacterized protein. (769 aa)
	FNYG_03255	Rab-GAP TBC domain-containing protein. (714 aa)
	FNYG_03396	Rho-GAP domain-containing protein. (730 aa)

Your Current Organism:

Fusarium nygamai

NCBI taxonomy Id: 42673
Other names: ATCC 58555, BBA 69862, CBS 749.97, DAOM 225148, F. nygamai, Gibberella nygamai, IMI 375354, NRRL 13448

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FNYG_00615	FNYG_00673	A0A2K0WTH1	A0A2K0WTJ7	Arf-GAP domain-containing protein.	Arf-GAP domain-containing protein.	0.907
FNYG_00615	FNYG_03410	A0A2K0WTH1	A0A2K0WLE7	Arf-GAP domain-containing protein.	Uncharacterized protein.	0.827
FNYG_00615	FNYG_09494	A0A2K0WTH1	A0A2K0W4J4	Arf-GAP domain-containing protein.	Uncharacterized protein.	0.895
FNYG_00615	FNYG_10954	A0A2K0WTH1	A0A2K0VZT9	Arf-GAP domain-containing protein.	CCHC-type domain-containing protein.	0.734
FNYG_00615	FNYG_11023	A0A2K0WTH1	A0A2K0W009	Arf-GAP domain-containing protein.	Arf-GAP domain-containing protein.	0.981
FNYG_00621	FNYG_03462	A0A2K0WTE4	A0A2K0WLJ7	Uncharacterized protein.	Rap-GAP domain-containing protein.	0.981
FNYG_00666	FNYG_12676	A0A2K0WTL7	A0A2K0VV65	Uncharacterized protein.	C-CAP/cofactor C-like domain-containing protein.	0.657
FNYG_00673	FNYG_00615	A0A2K0WTJ7	A0A2K0WTH1	Arf-GAP domain-containing protein.	Arf-GAP domain-containing protein.	0.907
FNYG_00673	FNYG_03410	A0A2K0WTJ7	A0A2K0WLE7	Arf-GAP domain-containing protein.	Uncharacterized protein.	0.833
FNYG_00673	FNYG_10954	A0A2K0WTJ7	A0A2K0VZT9	Arf-GAP domain-containing protein.	CCHC-type domain-containing protein.	0.683
FNYG_00673	FNYG_11023	A0A2K0WTJ7	A0A2K0W009	Arf-GAP domain-containing protein.	Arf-GAP domain-containing protein.	0.832
FNYG_02156	FNYG_08854	A0A2K0WQH5	A0A2K0W668	Uncharacterized protein.	Rab-GAP TBC domain-containing protein.	0.882
FNYG_02156	FNYG_11916	A0A2K0WQH5	A0A2K0VXN3	Uncharacterized protein.	Rab-GAP TBC domain-containing protein.	0.882
FNYG_02156	FNYG_13359	A0A2K0WQH5	A0A2K0VT85	Uncharacterized protein.	Rab-GAP TBC domain-containing protein.	0.982
FNYG_02203	FNYG_03255	A0A2K0WQR1	A0A2K0WKY3	Rab-GAP TBC domain-containing protein.	Rab-GAP TBC domain-containing protein.	0.491
FNYG_02203	FNYG_03544	A0A2K0WQR1	A0A2K0WLS0	Rab-GAP TBC domain-containing protein.	Rab-GAP TBC domain-containing protein.	0.474
FNYG_02203	FNYG_04176	A0A2K0WQR1	A0A2K0WJL1	Rab-GAP TBC domain-containing protein.	Rab-GAP TBC domain-containing protein.	0.509
FNYG_02203	FNYG_05901	A0A2K0WQR1	A0A2K0WES3	Rab-GAP TBC domain-containing protein.	Rab-GAP TBC domain-containing protein.	0.481
FNYG_02203	FNYG_11916	A0A2K0WQR1	A0A2K0VXN3	Rab-GAP TBC domain-containing protein.	Rab-GAP TBC domain-containing protein.	0.439
FNYG_02203	FNYG_15260	A0A2K0WQR1	A0A2K0UHQ1	Rab-GAP TBC domain-containing protein.	Rab-GAP TBC domain-containing protein.	0.510