5 items (Fusarium nygamai) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	FNYG_11571	JAB_MPN domain-containing protein. (2369 aa)
	LSM4	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (109 aa)
	FNYG_09260	WD_REPEATS_REGION domain-containing protein. (519 aa)
	FNYG_07688	RRM domain-containing protein. (368 aa)
	FNYG_02263	Uncharacterized protein. (404 aa)

Your Current Organism:

Fusarium nygamai

NCBI taxonomy Id: 42673
Other names: ATCC 58555, BBA 69862, CBS 749.97, DAOM 225148, F. nygamai, Gibberella nygamai, IMI 375354, NRRL 13448

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FNYG_02263	FNYG_07688	A0A2K0WQX5	A0A2K0W977	Uncharacterized protein.	RRM domain-containing protein.	0.987
FNYG_02263	FNYG_11571	A0A2K0WQX5	A0A2K0VYJ2	Uncharacterized protein.	JAB_MPN domain-containing protein.	0.986
FNYG_07688	FNYG_02263	A0A2K0W977	A0A2K0WQX5	RRM domain-containing protein.	Uncharacterized protein.	0.987
FNYG_07688	FNYG_11571	A0A2K0W977	A0A2K0VYJ2	RRM domain-containing protein.	JAB_MPN domain-containing protein.	0.986
FNYG_07688	LSM4	A0A2K0W977	A0A2K0W0R6	RRM domain-containing protein.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.700
FNYG_09260	FNYG_11571	A0A2K0W534	A0A2K0VYJ2	WD_REPEATS_REGION domain-containing protein.	JAB_MPN domain-containing protein.	0.991
FNYG_09260	LSM4	A0A2K0W534	A0A2K0W0R6	WD_REPEATS_REGION domain-containing protein.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.968
FNYG_11571	FNYG_02263	A0A2K0VYJ2	A0A2K0WQX5	JAB_MPN domain-containing protein.	Uncharacterized protein.	0.986
FNYG_11571	FNYG_07688	A0A2K0VYJ2	A0A2K0W977	JAB_MPN domain-containing protein.	RRM domain-containing protein.	0.986
FNYG_11571	FNYG_09260	A0A2K0VYJ2	A0A2K0W534	JAB_MPN domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.991
FNYG_11571	LSM4	A0A2K0VYJ2	A0A2K0W0R6	JAB_MPN domain-containing protein.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.977
LSM4	FNYG_07688	A0A2K0W0R6	A0A2K0W977	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	RRM domain-containing protein.	0.700
LSM4	FNYG_09260	A0A2K0W0R6	A0A2K0W534	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	WD_REPEATS_REGION domain-containing protein.	0.968
LSM4	FNYG_11571	A0A2K0W0R6	A0A2K0VYJ2	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	JAB_MPN domain-containing protein.	0.977