STRINGSTRING
FNYG_09368 FNYG_09368 FNYG_09327 FNYG_09327 FNYG_10407 FNYG_10407 FNYG_11463 FNYG_11463 FNYG_11459 FNYG_11459 FNYG_11460 FNYG_11460 FNYG_11774 FNYG_11774 FNYG_13418 FNYG_13418 FNYG_14361 FNYG_14361 FNYG_14793 FNYG_14793 FNYG_00470 FNYG_00470 FNYG_01147 FNYG_01147 FNYG_01896 FNYG_01896 FNYG_02215 FNYG_02215 FNYG_03567 FNYG_03567 FNYG_03568 FNYG_03568 FNYG_03936 FNYG_03936 FNYG_05022 FNYG_05022 FNYG_04995 FNYG_04995 FNYG_04742 FNYG_04742 CLP1 CLP1 FNYG_05063 FNYG_05063 FNYG_05902 FNYG_05902 FNYG_05903 FNYG_05903 FNYG_06415 FNYG_06415 FNYG_06955 FNYG_06955 FNYG_07595 FNYG_07595 FNYG_08267 FNYG_08267 FNYG_09391 FNYG_09391
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
FNYG_09368RRM domain-containing protein. (293 aa)
FNYG_09327DUF3453 domain-containing protein. (716 aa)
FNYG_10407CDC73_C domain-containing protein. (409 aa)
FNYG_11463Uncharacterized protein. (366 aa)
FNYG_11459Uncharacterized protein. (138 aa)
FNYG_11460RRM domain-containing protein. (258 aa)
FNYG_11774Uncharacterized protein. (618 aa)
FNYG_13418RPOL4c domain-containing protein. (158 aa)
FNYG_14361Uncharacterized protein. (1207 aa)
FNYG_14793Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (413 aa)
FNYG_00470Uncharacterized protein. (606 aa)
FNYG_01147CPSF_A domain-containing protein. (1427 aa)
FNYG_01896CID domain-containing protein. (406 aa)
FNYG_02215Uncharacterized protein. (338 aa)
FNYG_03567Uncharacterized protein. (252 aa)
FNYG_03568Uncharacterized protein. (359 aa)
FNYG_03936WD_REPEATS_REGION domain-containing protein. (576 aa)
FNYG_05022Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. (635 aa)
FNYG_04995WD_REPEATS_REGION domain-containing protein. (358 aa)
FNYG_04742Uncharacterized protein. (2425 aa)
CLP1mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation. (448 aa)
FNYG_05063Cleavage and polyadenylation specificity factor subunit 2. (962 aa)
FNYG_05902Uncharacterized protein. (120 aa)
FNYG_05903Uncharacterized protein. (420 aa)
FNYG_06415Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (264 aa)
FNYG_06955Plus3 domain-containing protein. (596 aa)
FNYG_07595Uncharacterized protein. (687 aa)
FNYG_08267WD_REPEATS_REGION domain-containing protein. (617 aa)
FNYG_09391Suf domain-containing protein. (991 aa)
Your Current Organism:
Fusarium nygamai
NCBI taxonomy Id: 42673
Other names: ATCC 58555, BBA 69862, CBS 749.97, DAOM 225148, F. nygamai, Gibberella nygamai, IMI 375354, NRRL 13448
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