(23 nodes) Positive regulation of cellular amide metabolic process network (Fusarium nygamai)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	FNYG_01988	Uncharacterized protein. (522 aa)
	FNYG_08327	Uncharacterized protein. (307 aa)
	FNYG_10730	S4 RNA-binding domain-containing protein. (528 aa)
	FNYG_11724	Uncharacterized protein. (172 aa)
	FNYG_12052	3'-5' exonuclease domain-containing protein. (543 aa)
	FNYG_12189	HET domain-containing protein. (939 aa)
	FNYG_12161	HET domain-containing protein. (649 aa)
	FNYG_13418	RPOL4c domain-containing protein. (158 aa)
	FNYG_14224	Uncharacterized protein. (223 aa)
	GUF1	Translation factor GUF1, mitochondrial; Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner. (649 aa)
	FNYG_14211	MIT domain-containing protein. (1309 aa)
	FNYG_14290	Eukaryotic translation initiation factor 5A. (164 aa)
	FNYG_15143	Fungal_trans domain-containing protein. (672 aa)
	FNYG_15676	Tr-type G domain-containing protein. (509 aa)
	FNYG_03388	Uncharacterized protein. (607 aa)
	FNYG_04164	Uncharacterized protein. (395 aa)
	FNYG_04550	S4 RNA-binding domain-containing protein. (191 aa)
	FNYG_05050	DUF155 domain-containing protein. (418 aa)
	FNYG_05369	Zn(2)-C6 fungal-type domain-containing protein. (674 aa)
	FNYG_06285	Uncharacterized protein. (178 aa)
	FNYG_00650	Fungal_trans domain-containing protein. (717 aa)
	FNYG_07553	RRM domain-containing protein. (577 aa)
	FNYG_01472	Zn(2)-C6 fungal-type domain-containing protein. (736 aa)

Your Current Organism:

Fusarium nygamai

NCBI taxonomy Id: 42673
Other names: ATCC 58555, BBA 69862, CBS 749.97, DAOM 225148, F. nygamai, Gibberella nygamai, IMI 375354, NRRL 13448

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FNYG_03388	FNYG_04550	A0A2K0WLB2	A0A2K0WIJ1	Uncharacterized protein.	S4 RNA-binding domain-containing protein.	0.927
FNYG_03388	FNYG_07553	A0A2K0WLB2	A0A2K0WA10	Uncharacterized protein.	RRM domain-containing protein.	0.413
FNYG_03388	FNYG_10730	A0A2K0WLB2	A0A2K0W0S0	Uncharacterized protein.	S4 RNA-binding domain-containing protein.	0.908
FNYG_03388	FNYG_15676	A0A2K0WLB2	A0A2K0U7U0	Uncharacterized protein.	Tr-type G domain-containing protein.	0.952
FNYG_04164	FNYG_04550	A0A2K0WJN4	A0A2K0WIJ1	Uncharacterized protein.	S4 RNA-binding domain-containing protein.	0.902
FNYG_04164	FNYG_10730	A0A2K0WJN4	A0A2K0W0S0	Uncharacterized protein.	S4 RNA-binding domain-containing protein.	0.902
FNYG_04164	FNYG_15676	A0A2K0WJN4	A0A2K0U7U0	Uncharacterized protein.	Tr-type G domain-containing protein.	0.677
FNYG_04550	FNYG_03388	A0A2K0WIJ1	A0A2K0WLB2	S4 RNA-binding domain-containing protein.	Uncharacterized protein.	0.927
FNYG_04550	FNYG_04164	A0A2K0WIJ1	A0A2K0WJN4	S4 RNA-binding domain-containing protein.	Uncharacterized protein.	0.902
FNYG_04550	FNYG_12161	A0A2K0WIJ1	A0A2K0VWY6	S4 RNA-binding domain-containing protein.	HET domain-containing protein.	0.902
FNYG_04550	FNYG_12189	A0A2K0WIJ1	A0A2K0VX12	S4 RNA-binding domain-containing protein.	HET domain-containing protein.	0.902
FNYG_04550	FNYG_14211	A0A2K0WIJ1	A0A2K0UTM2	S4 RNA-binding domain-containing protein.	MIT domain-containing protein.	0.848
FNYG_04550	FNYG_14224	A0A2K0WIJ1	A0A2K0UTN2	S4 RNA-binding domain-containing protein.	Uncharacterized protein.	0.412
FNYG_04550	FNYG_14290	A0A2K0WIJ1	A0A2K0UTA9	S4 RNA-binding domain-containing protein.	Eukaryotic translation initiation factor 5A.	0.992
FNYG_04550	FNYG_15676	A0A2K0WIJ1	A0A2K0U7U0	S4 RNA-binding domain-containing protein.	Tr-type G domain-containing protein.	0.979
FNYG_04550	GUF1	A0A2K0WIJ1	A0A2K0UTM8	S4 RNA-binding domain-containing protein.	Translation factor GUF1, mitochondrial; Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner.	0.848
FNYG_07553	FNYG_03388	A0A2K0WA10	A0A2K0WLB2	RRM domain-containing protein.	Uncharacterized protein.	0.413
FNYG_10730	FNYG_03388	A0A2K0W0S0	A0A2K0WLB2	S4 RNA-binding domain-containing protein.	Uncharacterized protein.	0.908
FNYG_10730	FNYG_04164	A0A2K0W0S0	A0A2K0WJN4	S4 RNA-binding domain-containing protein.	Uncharacterized protein.	0.902
FNYG_10730	FNYG_12161	A0A2K0W0S0	A0A2K0VWY6	S4 RNA-binding domain-containing protein.	HET domain-containing protein.	0.902