68 items (Fusarium nygamai) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	FNYG_15918	Uncharacterized protein. (398 aa)
	FNYG_15421	Uncharacterized protein. (500 aa)
	FNYG_15422	Uncharacterized protein. (438 aa)
	FNYG_15368	PKS_ER domain-containing protein. (343 aa)
	FNYG_15359	Uncharacterized protein. (194 aa)
	FNYG_15358	Helo_like_N domain-containing protein. (548 aa)
	FNYG_14832	F-box domain-containing protein. (529 aa)
	FNYG_14680	Uncharacterized protein. (186 aa)
	FNYG_14357	Adenylyl cyclase-associated protein; Belongs to the CAP family. (540 aa)
	FNYG_13766	Uncharacterized protein. (548 aa)
	FNYG_13170	Uncharacterized protein. (369 aa)
	FNYG_13218	BAH domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (1331 aa)
	FNYG_13124	Uncharacterized protein. (539 aa)
	FNYG_13018	Uncharacterized protein. (499 aa)
	FNYG_12994	Uncharacterized protein. (871 aa)
	FNYG_12955	ANK_REP_REGION domain-containing protein. (1790 aa)
	FNYG_12824	Uncharacterized protein. (203 aa)
	FNYG_12557	Uncharacterized protein. (349 aa)
	FNYG_12451	Uncharacterized protein. (510 aa)
	FNYG_12103	Uncharacterized protein. (543 aa)
	FNYG_12104	ANK_REP_REGION domain-containing protein. (492 aa)
	FNYG_12102	Uncharacterized protein. (410 aa)
	FNYG_12164	Uncharacterized protein. (479 aa)
	FNYG_11965	Uncharacterized protein. (707 aa)
	FNYG_11238	Uncharacterized protein. (667 aa)
	FNYG_10853	Uncharacterized protein. (644 aa)
	FNYG_10900	Uncharacterized protein. (542 aa)
	FNYG_10913	Tudor-knot domain-containing protein. (207 aa)
	FNYG_10914	MRG domain-containing protein. (296 aa)
	FNYG_10670	Uncharacterized protein. (612 aa)
	FNYG_10669	Serine protease; Belongs to the peptidase S1B family. (591 aa)
	FNYG_10408	Uncharacterized protein. (720 aa)
	FNYG_09586	Gln-synt_C domain-containing protein; Belongs to the glutamine synthetase family. (430 aa)
	FNYG_09441	Uncharacterized protein. (709 aa)
	FNYG_09521	Gln-synt_C domain-containing protein; Belongs to the glutamine synthetase family. (862 aa)
	FNYG_09385	Ras-GAP domain-containing protein. (776 aa)
	FNYG_08796	PHB domain-containing protein; Belongs to the band 7/mec-2 family. Flotillin subfamily. (523 aa)
	FNYG_08848	Uncharacterized protein. (125 aa)
	FNYG_08849	Uncharacterized protein. (166 aa)
	FNYG_08880	Uncharacterized protein. (202 aa)
	FNYG_08906	Actin-related protein 2/3 complex subunit 3; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. (192 aa)
	FNYG_07937	Uncharacterized protein. (688 aa)
	FNYG_07477	PITH domain-containing protein. (224 aa)
	FNYG_07478	Uncharacterized protein. (1023 aa)
	FNYG_07552	Serine/threonine-protein phosphatase. (401 aa)
	FNYG_07610	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1226 aa)
	FNYG_06584	Uncharacterized protein. (203 aa)
	FNYG_06415	Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (264 aa)
	FNYG_05904	E3 ubiquitin-protein ligase. (809 aa)
	FNYG_05453	Uncharacterized protein. (674 aa)
	FNYG_05111	Uncharacterized protein. (98 aa)
	FNYG_04755	Senescence domain-containing protein. (505 aa)
	FNYG_04959	Uncharacterized protein. (195 aa)
	FNYG_04203	Uncharacterized protein. (1456 aa)
	FNYG_03333	Uncharacterized protein. (1233 aa)
	FNYG_03366	Dopey_N domain-containing protein. (1871 aa)
	FNYG_03519	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (394 aa)
	FNYG_03669	Uncharacterized protein. (922 aa)
	FNYG_03719	Uncharacterized protein. (269 aa)
	FNYG_03012	Uncharacterized protein. (199 aa)
	FNYG_03069	SH3 domain-containing protein. (720 aa)
	FNYG_03068	Uncharacterized protein. (264 aa)
	FNYG_02557	Uncharacterized protein. (685 aa)
	FNYG_01274	F-box domain-containing protein. (526 aa)
	FNYG_01265	Uncharacterized protein. (597 aa)
	FNYG_01070	Uncharacterized protein. (271 aa)
	FNYG_00458	Uncharacterized protein. (195 aa)
	FNYG_00123	Uncharacterized protein. (167 aa)

Your Current Organism:

Fusarium nygamai

NCBI taxonomy Id: 42673
Other names: ATCC 58555, BBA 69862, CBS 749.97, DAOM 225148, F. nygamai, Gibberella nygamai, IMI 375354, NRRL 13448

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... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FNYG_00123	FNYG_04203	A0A2K0WVW4	A0A2K0WJP5	Uncharacterized protein.	Uncharacterized protein.	0.481
FNYG_00458	FNYG_01070	A0A2K0WVD1	A0A2K0WUS7	Uncharacterized protein.	Uncharacterized protein.	0.504
FNYG_00458	FNYG_01274	A0A2K0WVD1	A0A2K0WT32	Uncharacterized protein.	F-box domain-containing protein.	0.413
FNYG_00458	FNYG_02557	A0A2K0WVD1	A0A2K0WNL5	Uncharacterized protein.	Uncharacterized protein.	0.413
FNYG_00458	FNYG_03012	A0A2K0WVD1	A0A2K0WME7	Uncharacterized protein.	Uncharacterized protein.	0.660
FNYG_00458	FNYG_03333	A0A2K0WVD1	A0A2K0WL58	Uncharacterized protein.	Uncharacterized protein.	0.428
FNYG_00458	FNYG_03519	A0A2K0WVD1	A0A2K0WLP5	Uncharacterized protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.490
FNYG_00458	FNYG_03669	A0A2K0WVD1	A0A2K0WM43	Uncharacterized protein.	Uncharacterized protein.	0.407
FNYG_00458	FNYG_03719	A0A2K0WVD1	A0A2K0WM91	Uncharacterized protein.	Uncharacterized protein.	0.730
FNYG_00458	FNYG_04959	A0A2K0WVD1	A0A2K0WI27	Uncharacterized protein.	Uncharacterized protein.	0.786
FNYG_00458	FNYG_05111	A0A2K0WVD1	A0A2K0WH33	Uncharacterized protein.	Uncharacterized protein.	0.788
FNYG_00458	FNYG_05904	A0A2K0WVD1	A0A2K0WET4	Uncharacterized protein.	E3 ubiquitin-protein ligase.	0.465
FNYG_00458	FNYG_06584	A0A2K0WVD1	A0A2K0WC87	Uncharacterized protein.	Uncharacterized protein.	0.642
FNYG_00458	FNYG_07552	A0A2K0WVD1	A0A2K0WA19	Uncharacterized protein.	Serine/threonine-protein phosphatase.	0.428
FNYG_00458	FNYG_08796	A0A2K0WVD1	A0A2K0W612	Uncharacterized protein.	PHB domain-containing protein; Belongs to the band 7/mec-2 family. Flotillin subfamily.	0.603
FNYG_00458	FNYG_08848	A0A2K0WVD1	A0A2K0W659	Uncharacterized protein.	Uncharacterized protein.	0.701
FNYG_00458	FNYG_08849	A0A2K0WVD1	A0A2K0W665	Uncharacterized protein.	Uncharacterized protein.	0.701
FNYG_00458	FNYG_08880	A0A2K0WVD1	A0A2K0W6A0	Uncharacterized protein.	Uncharacterized protein.	0.504
FNYG_00458	FNYG_08906	A0A2K0WVD1	A0A2K0W6B5	Uncharacterized protein.	Actin-related protein 2/3 complex subunit 3; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks.	0.646
FNYG_00458	FNYG_09385	A0A2K0WVD1	A0A2K0W5H1	Uncharacterized protein.	Ras-GAP domain-containing protein.	0.804