36 items (Fusarium nygamai) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	FNYG_12567	WD_REPEATS_REGION domain-containing protein. (352 aa)
	FNYG_12511	Sm domain-containing protein. (133 aa)
	FNYG_12515	Uncharacterized protein. (534 aa)
	FNYG_09280	Uncharacterized protein. (974 aa)
	FNYG_09379	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (120 aa)
	FNYG_11571	JAB_MPN domain-containing protein. (2369 aa)
	FNYG_10247	Uncharacterized protein. (265 aa)
	FNYG_10251	Uncharacterized protein. (450 aa)
	FNYG_09439	Uncharacterized protein. (321 aa)
	FNYG_00541	PSP domain-containing protein. (603 aa)
	FNYG_00934	Tr-type G domain-containing protein. (1000 aa)
	FNYG_00941	Uncharacterized protein. (270 aa)
	FNYG_02131	RRM domain-containing protein. (144 aa)
	FNYG_03580	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (167 aa)
	FNYG_03331	SF3b1 domain-containing protein. (1210 aa)
	FNYG_03297	Small nuclear ribonucleoprotein Sm D2. (118 aa)
	FNYG_04143	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (162 aa)
	FNYG_04982	Pre-mRNA-splicing factor; Involved in mRNA splicing where it associates with cdc5 and the other cwf proteins as part of the spliceosome. (1436 aa)
	FNYG_04893	Uncharacterized protein. (237 aa)
	FNYG_06324	Uncharacterized protein. (930 aa)
	FNYG_06005	Uncharacterized protein. (300 aa)
	FNYG_06364	Uncharacterized protein. (674 aa)
	FNYG_06329	WD_REPEATS_REGION domain-containing protein. (459 aa)
	FNYG_06778	Uncharacterized protein. (484 aa)
	FNYG_06945	Uncharacterized protein. (200 aa)
	FNYG_07641	Sm domain-containing protein. (89 aa)
	FNYG_07622	WD_REPEATS_REGION domain-containing protein. (529 aa)
	FNYG_07688	RRM domain-containing protein. (368 aa)
	FNYG_08541	Sm domain-containing protein. (79 aa)
	FNYG_08961	Matrin-type domain-containing protein. (240 aa)
	FNYG_09194	RRM domain-containing protein. (116 aa)
	FNYG_09250	Uncharacterized protein. (621 aa)
	FNYG_13376	Sm domain-containing protein. (207 aa)
	FNYG_13449	Small nuclear ribonucleoprotein G. (91 aa)
	FNYG_14226	WD_REPEATS_REGION domain-containing protein. (354 aa)
	FNYG_13067	Uncharacterized protein. (309 aa)

Your Current Organism:

Fusarium nygamai

NCBI taxonomy Id: 42673
Other names: ATCC 58555, BBA 69862, CBS 749.97, DAOM 225148, F. nygamai, Gibberella nygamai, IMI 375354, NRRL 13448

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FNYG_00541	FNYG_00934	A0A2K0WVL1	A0A2K0WUC3	PSP domain-containing protein.	Tr-type G domain-containing protein.	0.968
FNYG_00541	FNYG_02131	A0A2K0WVL1	A0A2K0WQE6	PSP domain-containing protein.	RRM domain-containing protein.	0.908
FNYG_00541	FNYG_03297	A0A2K0WVL1	A0A2K0WL25	PSP domain-containing protein.	Small nuclear ribonucleoprotein Sm D2.	0.993
FNYG_00541	FNYG_03331	A0A2K0WVL1	A0A2K0WL55	PSP domain-containing protein.	SF3b1 domain-containing protein.	0.998
FNYG_00541	FNYG_03580	A0A2K0WVL1	A0A2K0WLV8	PSP domain-containing protein.	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.	0.556
FNYG_00541	FNYG_04143	A0A2K0WVL1	A0A2K0WJH7	PSP domain-containing protein.	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.	0.713
FNYG_00541	FNYG_04893	A0A2K0WVL1	A0A2K0WHV9	PSP domain-containing protein.	Uncharacterized protein.	0.925
FNYG_00541	FNYG_04982	A0A2K0WVL1	A0A2K0WI49	PSP domain-containing protein.	Pre-mRNA-splicing factor; Involved in mRNA splicing where it associates with cdc5 and the other cwf proteins as part of the spliceosome.	0.677
FNYG_00541	FNYG_06005	A0A2K0WVL1	A0A2K0WDR2	PSP domain-containing protein.	Uncharacterized protein.	0.978
FNYG_00541	FNYG_06324	A0A2K0WVL1	A0A2K0WEK3	PSP domain-containing protein.	Uncharacterized protein.	0.992
FNYG_00541	FNYG_06329	A0A2K0WVL1	A0A2K0WD88	PSP domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.946
FNYG_00541	FNYG_06364	A0A2K0WVL1	A0A2K0WDD7	PSP domain-containing protein.	Uncharacterized protein.	0.956
FNYG_00541	FNYG_06945	A0A2K0WVL1	A0A2K0WBD8	PSP domain-containing protein.	Uncharacterized protein.	0.711
FNYG_00541	FNYG_07622	A0A2K0WVL1	A0A2K0WA84	PSP domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.937
FNYG_00541	FNYG_07641	A0A2K0WVL1	A0A2K0WAA6	PSP domain-containing protein.	Sm domain-containing protein.	0.981
FNYG_00541	FNYG_07688	A0A2K0WVL1	A0A2K0W977	PSP domain-containing protein.	RRM domain-containing protein.	0.912
FNYG_00541	FNYG_08541	A0A2K0WVL1	A0A2K0W718	PSP domain-containing protein.	Sm domain-containing protein.	0.934
FNYG_00541	FNYG_08961	A0A2K0WVL1	A0A2K0W5V3	PSP domain-containing protein.	Matrin-type domain-containing protein.	0.995
FNYG_00541	FNYG_09194	A0A2K0WVL1	A0A2K0W4W6	PSP domain-containing protein.	RRM domain-containing protein.	0.992
FNYG_00541	FNYG_09280	A0A2K0WVL1	A0A2K0W556	PSP domain-containing protein.	Uncharacterized protein.	0.855