(30 nodes) Histone-fold network (Fusarium nygamai)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	FNYG_10754	CBFD_NFYB_HMF domain-containing protein. (177 aa)
	FNYG_03454	Uncharacterized protein. (113 aa)
	FNYG_03595	Uncharacterized protein. (253 aa)
	FNYG_02752	Uncharacterized protein. (309 aa)
	FNYG_01975	Histone H2B; Belongs to the histone H2B family. (138 aa)
	FNYG_01974	Histone H2A; Belongs to the histone H2A family. (134 aa)
	FNYG_02103	Bromo domain-containing protein. (1143 aa)
	FNYG_02173	Uncharacterized protein. (163 aa)
	FNYG_00829	CBFD_NFYB_HMF domain-containing protein. (138 aa)
	FNYG_00045	Histone H3; Belongs to the histone H3 family. (136 aa)
	FNYG_10473	Uncharacterized protein. (479 aa)
	FNYG_10300	Uncharacterized protein. (320 aa)
	FNYG_09520	Uncharacterized protein. (1265 aa)
	FNYG_08966	CBFD_NFYB_HMF domain-containing protein. (298 aa)
	FNYG_08869	Histone H2A; Belongs to the histone H2A family. (143 aa)
	FNYG_08720	TAFII28 domain-containing protein. (320 aa)
	FNYG_15004	Histone domain-containing protein. (49 aa)
	FNYG_14726	Histone domain-containing protein. (116 aa)
	FNYG_13737	TAF domain-containing protein. (463 aa)
	FNYG_13601	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (205 aa)
	FNYG_13547	Uncharacterized protein. (984 aa)
	FNYG_13392	BTP domain-containing protein. (232 aa)
	FNYG_11798	Uncharacterized protein. (306 aa)
	FNYG_11582	CBFD_NFYB_HMF domain-containing protein. (271 aa)
	FNYG_11443	CENP-T_C domain-containing protein. (529 aa)
	FNYG_10910	TFIID_20kDa domain-containing protein. (687 aa)
	FNYG_05090	CBFD_NFYB_HMF domain-containing protein. (78 aa)
	FNYG_00044	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
	FNYG_04904	CBFD_NFYB_HMF domain-containing protein. (328 aa)
	FNYG_03369	CBFD_NFYB_HMF domain-containing protein. (242 aa)

Your Current Organism:

Fusarium nygamai

NCBI taxonomy Id: 42673
Other names: ATCC 58555, BBA 69862, CBS 749.97, DAOM 225148, F. nygamai, Gibberella nygamai, IMI 375354, NRRL 13448

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FNYG_00044	FNYG_00045	A0A2K0WHX0	A0A2K0WWD8	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	Histone H3; Belongs to the histone H3 family.	0.977
FNYG_00044	FNYG_01974	A0A2K0WHX0	A0A2K0WPZ4	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	Histone H2A; Belongs to the histone H2A family.	0.996
FNYG_00044	FNYG_01975	A0A2K0WHX0	A0A2K0WPZ0	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	Histone H2B; Belongs to the histone H2B family.	0.994
FNYG_00044	FNYG_02103	A0A2K0WHX0	A0A2K0WQD7	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	Bromo domain-containing protein.	0.795
FNYG_00044	FNYG_03454	A0A2K0WHX0	A0A2K0WLH9	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	Uncharacterized protein.	0.487
FNYG_00044	FNYG_03595	A0A2K0WHX0	A0A2K0WLY0	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	Uncharacterized protein.	0.549
FNYG_00044	FNYG_05090	A0A2K0WHX0	A0A2K0WH27	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	CBFD_NFYB_HMF domain-containing protein.	0.670
FNYG_00044	FNYG_08869	A0A2K0WHX0	A0A2K0W690	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	Histone H2A; Belongs to the histone H2A family.	0.980
FNYG_00044	FNYG_10910	A0A2K0WHX0	A0A2K0W0N0	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	TFIID_20kDa domain-containing protein.	0.498
FNYG_00044	FNYG_13737	A0A2K0WHX0	A0A2K0UUX6	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	TAF domain-containing protein.	0.547
FNYG_00044	FNYG_14726	A0A2K0WHX0	A0A2K0UQ84	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	Histone domain-containing protein.	0.970
FNYG_00044	FNYG_15004	A0A2K0WHX0	A0A2K0UM12	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	Histone domain-containing protein.	0.965
FNYG_00045	FNYG_00044	A0A2K0WWD8	A0A2K0WHX0	Histone H3; Belongs to the histone H3 family.	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	0.977
FNYG_00045	FNYG_01974	A0A2K0WWD8	A0A2K0WPZ4	Histone H3; Belongs to the histone H3 family.	Histone H2A; Belongs to the histone H2A family.	0.985
FNYG_00045	FNYG_01975	A0A2K0WWD8	A0A2K0WPZ0	Histone H3; Belongs to the histone H3 family.	Histone H2B; Belongs to the histone H2B family.	0.990
FNYG_00045	FNYG_02103	A0A2K0WWD8	A0A2K0WQD7	Histone H3; Belongs to the histone H3 family.	Bromo domain-containing protein.	0.672
FNYG_00045	FNYG_03454	A0A2K0WWD8	A0A2K0WLH9	Histone H3; Belongs to the histone H3 family.	Uncharacterized protein.	0.492
FNYG_00045	FNYG_05090	A0A2K0WWD8	A0A2K0WH27	Histone H3; Belongs to the histone H3 family.	CBFD_NFYB_HMF domain-containing protein.	0.438
FNYG_00045	FNYG_08869	A0A2K0WWD8	A0A2K0W690	Histone H3; Belongs to the histone H3 family.	Histone H2A; Belongs to the histone H2A family.	0.982
FNYG_00045	FNYG_10910	A0A2K0WWD8	A0A2K0W0N0	Histone H3; Belongs to the histone H3 family.	TFIID_20kDa domain-containing protein.	0.416