(16 nodes) Ubiquitin specific protease domain network (Fusarium nygamai)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	FNYG_14537	Uncharacterized protein. (1056 aa)
	FNYG_12707	USP domain-containing protein; Belongs to the peptidase C19 family. (1155 aa)
	FNYG_12731	USP domain-containing protein; Belongs to the peptidase C19 family. (707 aa)
	FNYG_12582	Uncharacterized protein; Belongs to the peptidase C19 family. (1182 aa)
	FNYG_12501	Ubiquitin carboxyl-terminal hydrolase. (563 aa)
	FNYG_11736	Ubiquitin carboxyl-terminal hydrolase. (732 aa)
	FNYG_11612	Ubiquitin carboxyl-terminal hydrolase. (774 aa)
	FNYG_09798	UCH_1 domain-containing protein. (612 aa)
	FNYG_09799	Exonuclease domain-containing protein. (439 aa)
	FNYG_09711	Uncharacterized protein. (538 aa)
	FNYG_09356	Ubiquitin carboxyl-terminal hydrolase. (621 aa)
	FNYG_06420	Uncharacterized protein; Belongs to the peptidase C19 family. (1661 aa)
	FNYG_06279	Ubiquitin carboxyl-terminal hydrolase. (925 aa)
	FNYG_04944	USP domain-containing protein; Belongs to the peptidase C19 family. (2555 aa)
	FNYG_03822	Ubiquitinyl hydrolase 1. (514 aa)
	FNYG_03522	USP domain-containing protein. (858 aa)

Your Current Organism:

Fusarium nygamai

NCBI taxonomy Id: 42673
Other names: ATCC 58555, BBA 69862, CBS 749.97, DAOM 225148, F. nygamai, Gibberella nygamai, IMI 375354, NRRL 13448

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FNYG_03522	FNYG_06420	A0A2K0WLQ7	A0A2K0WD12	USP domain-containing protein.	Uncharacterized protein; Belongs to the peptidase C19 family.	0.702
FNYG_03522	FNYG_11612	A0A2K0WLQ7	A0A2K0VYL9	USP domain-containing protein.	Ubiquitin carboxyl-terminal hydrolase.	0.792
FNYG_03522	FNYG_12501	A0A2K0WLQ7	A0A2K0VVR4	USP domain-containing protein.	Ubiquitin carboxyl-terminal hydrolase.	0.429
FNYG_03822	FNYG_06420	A0A2K0WJZ4	A0A2K0WD12	Ubiquitinyl hydrolase 1.	Uncharacterized protein; Belongs to the peptidase C19 family.	0.625
FNYG_03822	FNYG_09711	A0A2K0WJZ4	A0A2K0W3V5	Ubiquitinyl hydrolase 1.	Uncharacterized protein.	0.442
FNYG_03822	FNYG_11612	A0A2K0WJZ4	A0A2K0VYL9	Ubiquitinyl hydrolase 1.	Ubiquitin carboxyl-terminal hydrolase.	0.495
FNYG_03822	FNYG_12501	A0A2K0WJZ4	A0A2K0VVR4	Ubiquitinyl hydrolase 1.	Ubiquitin carboxyl-terminal hydrolase.	0.554
FNYG_03822	FNYG_12707	A0A2K0WJZ4	A0A2K0VVB2	Ubiquitinyl hydrolase 1.	USP domain-containing protein; Belongs to the peptidase C19 family.	0.451
FNYG_04944	FNYG_06420	A0A2K0WI11	A0A2K0WD12	USP domain-containing protein; Belongs to the peptidase C19 family.	Uncharacterized protein; Belongs to the peptidase C19 family.	0.430
FNYG_04944	FNYG_11612	A0A2K0WI11	A0A2K0VYL9	USP domain-containing protein; Belongs to the peptidase C19 family.	Ubiquitin carboxyl-terminal hydrolase.	0.720
FNYG_04944	FNYG_14537	A0A2K0WI11	A0A2K0USN4	USP domain-containing protein; Belongs to the peptidase C19 family.	Uncharacterized protein.	0.519
FNYG_06279	FNYG_06420	A0A2K0WEH8	A0A2K0WD12	Ubiquitin carboxyl-terminal hydrolase.	Uncharacterized protein; Belongs to the peptidase C19 family.	0.842
FNYG_06279	FNYG_09711	A0A2K0WEH8	A0A2K0W3V5	Ubiquitin carboxyl-terminal hydrolase.	Uncharacterized protein.	0.452
FNYG_06279	FNYG_11612	A0A2K0WEH8	A0A2K0VYL9	Ubiquitin carboxyl-terminal hydrolase.	Ubiquitin carboxyl-terminal hydrolase.	0.829
FNYG_06279	FNYG_12501	A0A2K0WEH8	A0A2K0VVR4	Ubiquitin carboxyl-terminal hydrolase.	Ubiquitin carboxyl-terminal hydrolase.	0.480
FNYG_06279	FNYG_12582	A0A2K0WEH8	A0A2K0VVL1	Ubiquitin carboxyl-terminal hydrolase.	Uncharacterized protein; Belongs to the peptidase C19 family.	0.464
FNYG_06279	FNYG_12707	A0A2K0WEH8	A0A2K0VVB2	Ubiquitin carboxyl-terminal hydrolase.	USP domain-containing protein; Belongs to the peptidase C19 family.	0.642
FNYG_06420	FNYG_03522	A0A2K0WD12	A0A2K0WLQ7	Uncharacterized protein; Belongs to the peptidase C19 family.	USP domain-containing protein.	0.702
FNYG_06420	FNYG_03822	A0A2K0WD12	A0A2K0WJZ4	Uncharacterized protein; Belongs to the peptidase C19 family.	Ubiquitinyl hydrolase 1.	0.625
FNYG_06420	FNYG_04944	A0A2K0WD12	A0A2K0WI11	Uncharacterized protein; Belongs to the peptidase C19 family.	USP domain-containing protein; Belongs to the peptidase C19 family.	0.430